Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.55□□□□□ -1.36
COL5A2P05997 AL449283.1-201ENST00000602631 3403 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A2P05997 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.55□□□□□ -1.36
COL5A2P05997 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A2P05997 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A2P05997 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL5A2P05997 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A2P05997 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A2P05997 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A2P05997 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.55□□□□□ -1.36
COL5A2P05997 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A2P05997 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A2P05997 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.54□□□□□ -1.36
COL5A2P05997 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 RNA5SP397-201ENST00000391323 118 ntBASIC6.54□□□□□ -1.36
COL5A2P05997 AL390316.1-201ENST00000406279 553 ntBASIC6.54□□□□□ -1.36
COL5A2P05997 TBCAP2-201ENST00000416175 326 ntBASIC6.54□□□□□ -1.36
COL5A2P05997 AC023141.6-201ENST00000429418 337 ntBASIC6.54□□□□□ -1.36
COL5A2P05997 AC009238.2-201ENST00000431026 355 ntBASIC6.54□□□□□ -1.36
COL5A2P05997 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.54□□□□□ -1.36
COL5A2P05997 ARL2BPP10-201ENST00000446487 531 ntBASIC6.54□□□□□ -1.36
COL5A2P05997 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.54□□□□□ -1.36
COL5A2P05997 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.54□□□□□ -1.36
COL5A2P05997 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.54□□□□□ -1.36
COL5A2P05997 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.54□□□□□ -1.36
COL5A2P05997 AP001357.1-201ENST00000586304 1053 ntBASIC6.54□□□□□ -1.36
COL5A2P05997 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.54□□□□□ -1.36
COL5A2P05997 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.54□□□□□ -1.36
COL5A2P05997 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
COL5A2P05997 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL5A2P05997 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.54□□□□□ -1.36
COL5A2P05997 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A2P05997 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL5A2P05997 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.53□□□□□ -1.36
COL5A2P05997 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.53□□□□□ -1.36
COL5A2P05997 HMGB1P4-201ENST00000455362 567 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 RPS5P7-201ENST00000456664 608 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.53□□□□□ -1.36
COL5A2P05997 AC020937.1-201ENST00000519677 1013 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AC068831.4-201ENST00000556118 109 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AC069366.1-201ENST00000583159 838 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.53□□□□□ -1.36
COL5A2P05997 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.53□□□□□ -1.36
COL5A2P05997 AC019206.1-201ENST00000621938 425 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AC005618.4-201ENST00000625053 554 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 CASC19-260ENST00000641828 2001 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.53□□□□□ -1.36
COL5A2P05997 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.53□□□□□ -1.36
COL5A2P05997 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.53□□□□□ -1.36
COL5A2P05997 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL5A2P05997 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.53□□□□□ -1.36
COL5A2P05997 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
COL5A2P05997 RN7SKP227-201ENST00000364445 330 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 RNA5SP345-201ENST00000410646 108 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.53□□□□□ -1.36
COL5A2P05997 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.53□□□□□ -1.36
COL5A2P05997 MED28P3-201ENST00000444288 531 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 BX842559.2-201ENST00000451418 605 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.53□□□□□ -1.36
COL5A2P05997 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.53□□□□□ -1.36
COL5A2P05997 SNORA70.11-201ENST00000515987 138 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 SNORA70.13-201ENST00000516116 138 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.53□□□□□ -1.36
COL5A2P05997 AL020997.2-201ENST00000602607 184 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AC092653.1-201ENST00000608509 531 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 AL392048.1-201ENST00000613946 534 ntBASIC6.53□□□□□ -1.36
COL5A2P05997 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
COL5A2P05997 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.53□□□□□ -1.36
COL5A2P05997 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
COL5A2P05997 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.52□□□□□ -1.37
COL5A2P05997 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
COL5A2P05997 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.52□□□□□ -1.37
COL5A2P05997 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A2P05997 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A2P05997 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A2P05997 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL5A2P05997 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.52□□□□□ -1.37
COL5A2P05997 CASC19-243ENST00000641588 1546 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL5A2P05997 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.52□□□□□ -1.37
COL5A2P05997 AC006065.1-201ENST00000422539 802 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms