Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC079315.1-201ENST00000602952 623 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC067773.1-201ENST00000603284 1094 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 CDC27P2-201ENST00000425026 1922 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 BTBD10P1-201ENST00000549824 1352 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 TMSB4XP2-201ENST00000335179 210 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 SUGT1P2-201ENST00000379452 992 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 MIR551A-201ENST00000385042 96 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AL390316.1-201ENST00000406279 553 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AK4P4-201ENST00000419465 646 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 E2F6P2-201ENST00000420708 748 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 BX284632.2-201ENST00000421091 399 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC009238.2-201ENST00000431026 355 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 PCNPP2-201ENST00000441651 455 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AL512605.1-202ENST00000441919 381 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AL359955.2-201ENST00000445380 353 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 OR6C72P-201ENST00000451403 892 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 HLA-DPA3-207ENST00000454398 229 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 OR7L1P-201ENST00000456181 380 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 RN7SL189P-201ENST00000468631 289 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 SEPT7P6-201ENST00000469999 1143 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 RPL23AP37-201ENST00000479658 549 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC009120.1-201ENST00000493458 473 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 RPEP1-201ENST00000504507 658 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 STMN1P2-201ENST00000508435 439 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 Y_RNA.667-201ENST00000516212 107 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 RNA5SP473-201ENST00000516402 125 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AP005403.1-201ENST00000579720 229 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC087283.1-201ENST00000604029 1074 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC138473.1-201ENST00000605717 526 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 uc_338.18-201ENST00000615451 175 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC108359.1-201ENST00000616451 1211 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AC243960.7-201ENST00000623532 707 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 MAPK10-303ENST00000641324 3959 ntBASIC3.89□□□□□ -1.79
HLA-DQA1P01909 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HLA-DQA1P01909 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 TTC39DP-201ENST00000416781 1688 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 RNU1-94P-201ENST00000362627 173 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 RNU4-44P-201ENST00000363050 141 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 MIR621-201ENST00000384919 96 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 AC098592.2-201ENST00000413158 265 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 AC009237.10-201ENST00000414112 510 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 RPL24P2-201ENST00000421023 475 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 AL161722.2-201ENST00000434731 981 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DQA1P01909 RPS26P2-201ENST00000440331 348 ntBASIC3.88□□□□□ -1.79
HLA-DQA1P01909 SNRPFP2-201ENST00000440710 251 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms