Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PROM1O43490 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 AP000859.1-201ENST00000525536 307 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.7□□□□□ -1.5
PROM1O43490 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 AC067773.1-201ENST00000603284 1094 ntBASIC5.7□□□□□ -1.5
PROM1O43490 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 AC013470.4-201ENST00000619978 986 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AC074140.1-201ENST00000621617 208 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AC000095.2-202ENST00000637415 154 ntBASIC5.7□□□□□ -1.5
PROM1O43490 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PROM1O43490 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PROM1O43490 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 MTND5P11-201ENST00000511037 1812 ntBASIC5.69□□□□□ -1.5
PROM1O43490 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 RLIMP2-201ENST00000427891 1563 ntBASIC5.69□□□□□ -1.5
PROM1O43490 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 OR10R3P-201ENST00000361688 942 ntBASIC5.69□□□□□ -1.5
PROM1O43490 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 SNORA51.9-201ENST00000384295 124 ntBASIC5.69□□□□□ -1.5
PROM1O43490 RNU6-1320P-201ENST00000390838 107 ntBASIC5.69□□□□□ -1.5
PROM1O43490 RNU6-1269P-201ENST00000391139 107 ntBASIC5.69□□□□□ -1.5
PROM1O43490 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 AC119751.3-201ENST00000399720 670 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 AL158825.1-201ENST00000414735 521 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AL354868.1-201ENST00000417077 482 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC009518.2-201ENST00000418056 731 ntBASIC5.69□□□□□ -1.5
PROM1O43490 MTND2P18-201ENST00000419962 1030 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 PNKDP1-201ENST00000435914 430 ntBASIC5.69□□□□□ -1.5
PROM1O43490 CDY12P-201ENST00000440679 1015 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AL391987.1-201ENST00000441025 200 ntBASIC5.69□□□□□ -1.5
PROM1O43490 CUBNP2-201ENST00000443534 1139 ntBASIC5.69□□□□□ -1.5
PROM1O43490 CDY13P-201ENST00000445813 1015 ntBASIC5.69□□□□□ -1.5
PROM1O43490 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 CCRL1P1-201ENST00000449542 1053 ntBASIC5.69□□□□□ -1.5
PROM1O43490 SDC4P-201ENST00000453285 601 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 AC008280.2-201ENST00000455473 307 ntBASIC5.69□□□□□ -1.5
PROM1O43490 RNU6-599P-201ENST00000459383 107 ntBASIC5.69□□□□□ -1.5
PROM1O43490 RNU6-1193P-201ENST00000459461 107 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC010468.1-201ENST00000461022 817 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC107015.1-201ENST00000466902 747 ntBASIC5.69□□□□□ -1.5
PROM1O43490 SYT14P1-201ENST00000481459 721 ntBASIC5.69□□□□□ -1.5
PROM1O43490 OR11I1P-201ENST00000486033 954 ntBASIC5.69□□□□□ -1.5
PROM1O43490 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 RPL21P131-201ENST00000497298 483 ntBASIC5.69□□□□□ -1.5
PROM1O43490 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 AL358913.1-201ENST00000554342 121 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.69□□□□□ -1.5
PROM1O43490 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 CCDC58P3-201ENST00000590792 430 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.69□□□□□ -1.5
PROM1O43490 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 AP004372.1-201ENST00000604842 844 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC108865.2-201ENST00000606881 432 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 AL096712.1-201ENST00000614561 159 ntBASIC5.69□□□□□ -1.5
PROM1O43490 AC092140.2-201ENST00000618027 521 ntBASIC5.69□□□□□ -1.5
PROM1O43490 RNU6-368P-201ENST00000620928 107 ntBASIC5.69□□□□□ -1.5
PROM1O43490 RNU6-538P-201ENST00000622329 107 ntBASIC5.69□□□□□ -1.5
PROM1O43490 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms