Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXN3O00409 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXN3O00409 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXN3O00409 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXN3O00409 BX276092.6-201ENST00000430476 250 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.03□□□□□ -1.44
FOXN3O00409 AL035458.1-201ENST00000433096 585 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXN3O00409 AL606517.1-201ENST00000446914 387 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXN3O00409 RPS26P41-201ENST00000450370 284 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 OR52E7P-201ENST00000452394 933 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 BX276092.8-201ENST00000455722 250 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC011476.1-201ENST00000466725 307 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 RPS17P11-201ENST00000474297 293 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC022215.1-201ENST00000481770 362 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC025459.1-201ENST00000504072 156 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXN3O00409 HMGB1P42-201ENST00000532126 553 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AL049870.4-201ENST00000555741 486 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXN3O00409 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXN3O00409 MIR4311-201ENST00000580794 100 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.03□□□□□ -1.44
FOXN3O00409 AC124016.2-201ENST00000610058 665 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 AC084824.4-201ENST00000620106 731 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC090506.2-201ENST00000624521 419 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXN3O00409 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 AC106754.1-201ENST00000562632 1513 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXN3O00409 AC010266.2-201ENST00000564741 3255 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AL034546.1-201ENST00000623740 3693 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC140134.1-201ENST00000511830 3544 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 CASC19-260ENST00000641828 2001 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
FOXN3O00409 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
FOXN3O00409 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 RNA5SP394-201ENST00000364216 119 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 RNU6-1257P-201ENST00000384625 110 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 AP002784.2-201ENST00000397300 549 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 OOSP1-201ENST00000398992 1270 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 PEX12P1-201ENST00000400284 1048 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 HMGB1P20-201ENST00000402555 677 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 AL136131.1-201ENST00000406079 803 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 SNORA11.5-201ENST00000408163 128 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 RNU4-74P-201ENST00000411280 161 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXN3O00409 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 DEFB130D-201ENST00000426866 237 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 AC005189.1-201ENST00000431286 310 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 FABP5P3-201ENST00000437960 408 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXN3O00409 AC092106.1-201ENST00000444291 373 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 LINC02210-201ENST00000444561 288 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 NXT1P1-201ENST00000458481 316 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 RPS3AP15-201ENST00000483874 781 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 SNORA70.20-201ENST00000516848 126 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXN3O00409 AL121594.4-201ENST00000556211 1196 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXN3O00409 AC084759.1-201ENST00000561168 290 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.02□□□□□ -1.45
FOXN3O00409 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXN3O00409 OR7A19P-201ENST00000608051 733 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXN3O00409 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.02□□□□□ -1.45
FOXN3O00409 SAMMSON-213ENST00000641336 1521 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 AL606537.1-201ENST00000607258 2011 ntBASIC6.02□□□□□ -1.45
FOXN3O00409 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXN3O00409 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
FOXN3O00409 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXN3O00409 AC007938.2-201ENST00000604666 2634 ntBASIC6.01□□□□□ -1.45
FOXN3O00409 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
FOXN3O00409 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms