Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AL049830.4-201ENST00000555149 351 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AC097063.1-201ENST00000426714 1797 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 RN7SKP160-201ENST00000363804 340 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 U3.25-201ENST00000391209 220 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 NPM1P40-201ENST00000412758 733 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 SLC35E1P1-201ENST00000419313 864 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 OR52B5P-201ENST00000435337 951 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC245047.2-201ENST00000441060 530 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 TCEA1P1-201ENST00000449716 880 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 IGHV5-78-201ENST00000450948 295 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 OR2AO1P-201ENST00000476497 403 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC024558.1-201ENST00000505008 528 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 ENPP7P9-201ENST00000514456 627 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 RNA5SP249-201ENST00000516127 99 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AP002373.2-201ENST00000541631 1060 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC095055.1-201ENST00000603472 1113 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AC015660.5-201ENST00000623238 564 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 OR52B5P-202ENST00000641118 1110 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 STX3-208ENST00000641815 3236 ntBASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAV27A0A087WT01 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC009643.2-201ENST00000603543 1448 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 RN7SKP162-201ENST00000363605 345 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 ATP5HP3-201ENST00000396994 486 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AL078599.1-201ENST00000402075 293 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AL354714.3-201ENST00000447284 493 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC092647.2-201ENST00000452998 253 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 RN7SL174P-201ENST00000475578 289 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC090686.1-201ENST00000481577 749 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 CYCSP40-201ENST00000575927 294 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 EIF1P5-201ENST00000585002 234 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC105254.2-201ENST00000603636 436 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 IMMP1LP3-201ENST00000604197 224 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AC126915.2-201ENST00000610957 190 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AL672167.1-205ENST00000641112 3080 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRAV27A0A087WT01 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms