Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 Z82190.1-201ENST00000454534 490 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RPL7P48-201ENST00000461513 746 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AP003080.1-202ENST00000526526 915 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 SSU72P6-201ENST00000532644 488 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AL121594.2-201ENST00000541658 472 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC092718.4-201ENST00000566639 716 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 MIR1273F-201ENST00000580581 99 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC090312.2-201ENST00000582687 378 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 OR5AH1P-201ENST00000595968 283 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC012065.3-201ENST00000602736 439 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AP001554.1-201ENST00000604533 376 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC097468.3-201ENST00000607956 456 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC093388.1-201ENST00000609166 430 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AL022238.3-201ENST00000609279 443 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 MIR8082-201ENST00000612488 81 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AL121985.2-201ENST00000621192 555 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.27□□□□□ -1.24
PCDHB11Q9Y5F2 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
PCDHB11Q9Y5F2 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PCDHB11Q9Y5F2 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 DDX50P1-201ENST00000438163 2400 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AL096816.1-201ENST00000623300 2920 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 SNORA73B-201ENST00000363217 204 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC113608.1-201ENST00000398740 305 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AL139100.1-201ENST00000408001 498 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 VN1R36P-201ENST00000414936 291 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AL353729.1-201ENST00000425044 720 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 SNX18P14-201ENST00000429308 574 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC105052.2-201ENST00000434317 794 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 LIN28AP2-201ENST00000445283 458 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 RPL31P15-201ENST00000449770 338 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 SLAMF6P1-201ENST00000451067 602 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC103563.5-201ENST00000455643 364 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 NF1P3-201ENST00000457709 450 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC096922.1-201ENST00000461635 651 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AL035404.1-201ENST00000497982 568 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC112204.1-201ENST00000502591 103 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 NPY6R-201ENST00000503807 1112 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 RNA5SP96-201ENST00000516041 107 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 RNU2-46P-201ENST00000517038 113 ntBASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHB11Q9Y5F2 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms