Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 RNU4-2-201ENST00000365668 141 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 RPL12P9-201ENST00000412942 488 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 AL139148.1-201ENST00000427122 680 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 RPL7L1P9-201ENST00000431298 745 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 CYCSP12-201ENST00000437729 300 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 CNOT7P2-201ENST00000441051 832 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC019185.1-201ENST00000442718 389 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 SEPT7P6-201ENST00000469999 1143 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC008953.1-201ENST00000497334 318 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC147055.1-201ENST00000509261 750 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 EIF3KP3-201ENST00000514461 639 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 H3F3BP2-201ENST00000583907 357 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC005229.3-201ENST00000603438 323 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 GMCL1P2-201ENST00000605230 823 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 AL159169.2-201ENST00000610061 1269 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 MIR7155-201ENST00000615925 56 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC107905.1-201ENST00000616204 426 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 AC136428.4-201ENST00000634254 1155 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 SAMMSON-209ENST00000641222 1100 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF6Q9Y252 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 CDC27P2-201ENST00000425026 1922 ntBASIC5.03□□□□□ -1.6
RNF6Q9Y252 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF6Q9Y252 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
RNF6Q9Y252 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC025574.1-201ENST00000554784 1653 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC022417.1-201ENST00000624768 1303 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 TCP1P3-201ENST00000414406 1498 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 RNA5SP30-201ENST00000365552 115 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 SNORA48.4-201ENST00000391089 134 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 GABARAPL3-201ENST00000412799 354 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 NENFP1-201ENST00000419476 466 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC006455.6-201ENST00000426192 893 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 EEF1B2P5-201ENST00000444820 548 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC005532.2-201ENST00000467154 373 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AP000797.2-201ENST00000475768 606 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC091544.1-201ENST00000484702 348 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 NDUFA5P12-201ENST00000503796 343 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 SCARNA20.4-201ENST00000516969 131 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC008126.1-201ENST00000549019 480 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AL049874.4-201ENST00000557593 255 ntBASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF6Q9Y252 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF6Q9Y252 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms