Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TCEAL4P1-201ENST00000453620 588 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 FGF7P3-201ENST00000454645 303 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL153P-201ENST00000486501 292 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL182P-201ENST00000496499 300 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 MTND6P2-201ENST00000512226 524 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 snoU109.5-201ENST00000516231 132 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 RNU6-1225P-201ENST00000516336 65 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 SNORA18.6-201ENST00000516792 115 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 MIR3171-201ENST00000584270 74 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 7SK.7-201ENST00000603504 247 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC107214.2-201ENST00000608204 634 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 MIR7162-201ENST00000611134 69 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL680P-201ENST00000620379 299 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 MIR1302-1-201ENST00000637932 143 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CRYM-AS1-204ENST00000637983 556 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 PROS2P-201ENST00000474651 1951 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 KYNUP1-201ENST00000466683 1406 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC015871.3-201ENST00000618835 2261 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 Y_RNA.315-201ENST00000365117 102 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RNU6-331P-201ENST00000384724 107 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 SNORD65.1-201ENST00000390889 71 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AL049693.1-201ENST00000402760 611 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 SNX18P13-201ENST00000412442 529 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC009237.9-201ENST00000414800 347 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RPS7P15-201ENST00000415804 584 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RAC1P4-201ENST00000419413 579 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC013403.1-201ENST00000436954 263 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RABEPKP1-201ENST00000440529 1026 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 PSAT1P4-201ENST00000466500 526 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL58P-201ENST00000473445 294 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC104687.1-201ENST00000485829 412 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC117395.1-201ENST00000487390 403 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL612P-201ENST00000497704 295 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms