Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU4-89P-201ENST00000607443 133 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AL121757.2-201ENST00000611223 313 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AL133243.2-201ENST00000610331 1621 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 THAP12P7-201ENST00000520248 2290 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AOX3P-204ENST00000491025 2107 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RNA5SP452-201ENST00000363004 119 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RNU6-169P-201ENST00000365336 107 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 CENPW-202ENST00000368326 443 ntTSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 CD160-203ENST00000401557 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 CNOT4P1-201ENST00000417432 1199 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RPL12P34-201ENST00000424532 479 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RIMKLBP2-201ENST00000424737 654 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 GAPDHP19-201ENST00000431768 1005 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RPL35P8-201ENST00000433284 337 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC123904.1-201ENST00000441072 368 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AL359979.1-201ENST00000446145 487 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC002553.2-201ENST00000453217 340 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 DCD-202ENST00000456047 670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC108059.3-201ENST00000456388 214 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC018638.2-201ENST00000471258 403 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC022034.3-201ENST00000471393 478 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RN7SL250P-201ENST00000475154 258 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 SEMA6A-AS1-201ENST00000507558 436 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 GUSBP3-201ENST00000509348 423 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC025423.3-201ENST00000541551 469 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 LYZ-202ENST00000548839 558 ntTSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AL442663.4-201ENST00000555304 289 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 MIR3918-201ENST00000581555 93 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 MIR4440-201ENST00000583986 98 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 CD160-204ENST00000584442 219 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 BX323046.1-201ENST00000610145 535 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 uc_338.12-201ENST00000616344 181 ntBASIC9.43□□□□□ -0.9
RTN4Q9NQC3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RTN4Q9NQC3 AC008758.3-201ENST00000507003 1829 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 CAP1P2-201ENST00000417455 1409 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AL160408.1-201ENST00000417805 1373 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AP000766.1-201ENST00000561746 4140 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms