Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.82□□□□□ -1.48
USP29Q9HBJ7 IGBP1P1-201ENST00000554337 1009 ntBASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AL589674.2-201ENST00000604304 337 ntBASIC5.82□□□□□ -1.48
USP29Q9HBJ7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.82□□□□□ -1.48
USP29Q9HBJ7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 AP003476.1-201ENST00000623984 516 ntBASIC5.82□□□□□ -1.48
USP29Q9HBJ7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP29Q9HBJ7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AL034546.1-201ENST00000623740 3693 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 RNA5SP46-201ENST00000362370 120 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 RNU4-27P-201ENST00000410889 139 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 MTCO2P8-201ENST00000412213 658 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC013262.1-201ENST00000426710 252 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 MTCO1P51-201ENST00000427672 1060 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 MTND2P40-201ENST00000436718 841 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AL138787.1-202ENST00000437804 898 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC002504.1-201ENST00000438281 691 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AL596266.1-201ENST00000448132 400 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 DPPA2P4-201ENST00000563717 878 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC009237.13-201ENST00000603193 276 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AL583832.1-201ENST00000603227 784 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC015849.2-201ENST00000605738 409 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC004241.3-201ENST00000611728 517 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AL512624.1-201ENST00000613638 469 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC013437.2-201ENST00000639587 677 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC104964.3-201ENST00000606115 2860 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 TCP1P3-201ENST00000414406 1498 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC092111.2-201ENST00000611627 1414 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 OR4F13P-202ENST00000560066 2054 ntBASIC5.81□□□□□ -1.48
USP29Q9HBJ7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
USP29Q9HBJ7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP29Q9HBJ7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms