Protein–RNA interactions for Protein: Q9BVL2

NUP58, Nucleoporin p58/p45, humanhuman

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58Q9BVL2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 SAMMSON-209ENST00000641222 1100 ntBASIC5.7□□□□□ -1.5
NUP58Q9BVL2 AC073869.10-201ENST00000642016 354 ntBASIC5.7□□□□□ -1.5
NUP58Q9BVL2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NUP58Q9BVL2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 RNU6-171P-201ENST00000384354 107 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AL161722.1-201ENST00000446972 1032 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC090638.1-201ENST00000498296 909 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC006499.3-201ENST00000506077 748 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 OR8A2P-201ENST00000528631 952 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC008814.1-201ENST00000603797 406 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AL512329.2-201ENST00000607350 548 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC108359.1-201ENST00000616451 1211 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC037198.3-201ENST00000616754 526 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC118658.2-201ENST00000618697 459 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP58Q9BVL2 AC025574.1-201ENST00000554784 1653 ntBASIC5.69□□□□□ -1.5
NUP58Q9BVL2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 MIR133B-201ENST00000362210 119 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 RN7SKP74-201ENST00000362849 309 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 MIR223-201ENST00000385204 110 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 RNA5SP92-201ENST00000516437 110 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC105031.1-201ENST00000518550 476 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 BLZF2P-201ENST00000553776 1130 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC127381.1-201ENST00000555979 939 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC044860.2-201ENST00000561005 179 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC011840.5-201ENST00000582125 771 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 RNU6-84P-201ENST00000607737 102 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AC000068.2-201ENST00000608816 460 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.68□□□□□ -1.5
NUP58Q9BVL2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP58Q9BVL2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP58Q9BVL2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP58Q9BVL2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP58Q9BVL2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP58Q9BVL2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP58Q9BVL2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP58Q9BVL2 SNORA70-201ENST00000384436 135 ntBASIC5.67□□□□□ -1.5
NUP58Q9BVL2 AL390316.1-201ENST00000406279 553 ntBASIC5.67□□□□□ -1.5
NUP58Q9BVL2 RN7SKP16-201ENST00000410180 299 ntBASIC5.67□□□□□ -1.5
NUP58Q9BVL2 SLC35E1P1-201ENST00000419313 864 ntBASIC5.67□□□□□ -1.5
NUP58Q9BVL2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP58Q9BVL2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms