Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC008429.4-201ENST00000521201 182 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC068305.2-201ENST00000550567 1205 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AL356801.1-201ENST00000559320 294 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC145423.1-201ENST00000605712 336 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC087241.4-201ENST00000612441 480 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC099786.3-201ENST00000565735 1410 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC083837.1-201ENST00000565297 2994 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC092724.1-201ENST00000624623 3397 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 HSPD1P16-201ENST00000402302 394 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC015977.1-201ENST00000418887 292 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 OSTCP5-201ENST00000425293 453 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AL390023.1-201ENST00000428836 262 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 MTND2P21-201ENST00000436242 1042 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AL445567.1-201ENST00000439121 144 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 SDC4P-201ENST00000453285 601 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 RPL31P3-201ENST00000458430 332 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 UGT2A3P7-201ENST00000510485 734 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ASNSP4-201ENST00000511103 447 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 MRPS33P3-201ENST00000513456 322 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC027455.1-201ENST00000574104 594 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC100767.2-201ENST00000604840 693 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC131159.1-201ENST00000621854 213 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 OR8B1P-202ENST00000641132 1178 ntBASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP1Q96SZ6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP1Q96SZ6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP1Q96SZ6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms