Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AL139384.2-201ENST00000613809 3590 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
PTCHD1Q96NR3 AC012078.1-201ENST00000405035 1646 ntBASIC6.21□□□□□ -1.41
PTCHD1Q96NR3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.21□□□□□ -1.41
PTCHD1Q96NR3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.21□□□□□ -1.41
PTCHD1Q96NR3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PTCHD1Q96NR3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
PTCHD1Q96NR3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.21□□□□□ -1.41
PTCHD1Q96NR3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC007485.2-201ENST00000623493 1667 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 RNU5E-4P-201ENST00000364931 120 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 MIR525-201ENST00000384978 85 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 OR8G2P-201ENST00000412796 908 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 RPS15AP38-201ENST00000413110 372 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AL161449.1-201ENST00000414531 1199 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 Z82198.3-201ENST00000421145 199 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 FAM96AP1-201ENST00000430879 482 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 GAPDHP19-201ENST00000431768 1005 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 USP9YP22-201ENST00000438971 294 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AL353093.1-201ENST00000441292 436 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 GAPDHP37-201ENST00000442317 968 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC092601.1-201ENST00000444526 383 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 RANP1-206ENST00000455094 651 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 SULT1D1P-201ENST00000458020 882 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC023818.1-201ENST00000498379 384 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 MTND6P8-201ENST00000503471 522 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC023245.2-201ENST00000530760 2978 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AP001317.1-201ENST00000531194 960 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 OR8G3P-201ENST00000533406 921 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC068305.2-201ENST00000550567 1205 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AL162632.2-201ENST00000553933 399 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC008507.1-201ENST00000587506 734 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC114477.1-201ENST00000605097 605 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC126118.1-201ENST00000607744 628 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC024941.1-201ENST00000612250 334 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC023158.2-201ENST00000614876 543 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AL136981.2-201ENST00000617319 734 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC135068.5-201ENST00000624197 983 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AC217777.1-201ENST00000570034 1471 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AP000866.6-201ENST00000638898 3579 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 AL022323.4-201ENST00000623980 13120 ntBASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTCHD1Q96NR3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC116158.1-201ENST00000560231 2129 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 NSRP1P1-201ENST00000444067 1693 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms