Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAB43Q86YS6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAB43Q86YS6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAB43Q86YS6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAB43Q86YS6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 AC114947.2-201ENST00000565748 2125 ntBASIC5.05□□□□□ -1.6
RAB43Q86YS6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RAB43Q86YS6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB43Q86YS6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB43Q86YS6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB43Q86YS6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB43Q86YS6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAB43Q86YS6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 U3.2-201ENST00000362981 210 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 SNORA16A-201ENST00000384342 137 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 MIR105-1-201ENST00000385222 81 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AL589647.1-201ENST00000402485 466 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 LINC02210-201ENST00000444561 288 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC073850.1-201ENST00000449243 255 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC090589.1-201ENST00000473109 362 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 RN7SL97P-201ENST00000486780 299 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC015864.1-201ENST00000496512 544 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC021193.1-201ENST00000511607 420 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 MIR4646-201ENST00000580775 63 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC006272.2-201ENST00000594725 163 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AL445222.1-201ENST00000607259 628 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC090527.3-201ENST00000619041 548 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 AP002799.1-201ENST00000623552 423 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 AC131971.1-201ENST00000332881 1482 ntBASIC5.04□□□□□ -1.6
RAB43Q86YS6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB43Q86YS6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAB43Q86YS6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 SNORD56.6-201ENST00000384569 71 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 U3.36-201ENST00000408418 213 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 RPSAP35-201ENST00000413753 818 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 VN1R54P-201ENST00000435210 1049 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 AL136455.1-201ENST00000441083 1240 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 AL035090.1-201ENST00000454835 332 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC092754.1-201ENST00000472975 479 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 RPL7P6-201ENST00000480903 738 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 RN7SL808P-201ENST00000496066 299 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC098976.1-201ENST00000513014 541 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 RN7SKP66-201ENST00000516681 231 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 OR4A46P-201ENST00000527255 933 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC024940.3-201ENST00000538551 316 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC006116.3-201ENST00000592968 361 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 AC090510.2-201ENST00000617465 629 ntBASIC5.03□□□□□ -1.6
RAB43Q86YS6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB43Q86YS6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RAB43Q86YS6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAB43Q86YS6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms