Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC110792.3-201ENST00000595906 1614 ntBASIC5.81□□□□□ -1.48
SNX30Q5VWJ9 TCP11X1-202ENST00000622971 1372 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 RN7SKP145-201ENST00000363291 303 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 SNORD115-48-201ENST00000364764 76 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC005042.1-201ENST00000393397 800 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 UBE2V1P15-201ENST00000407776 448 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 CYCSP12-201ENST00000437729 300 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AL691517.1-201ENST00000440833 1235 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AL163193.1-201ENST00000444895 788 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 RPL7P45-201ENST00000455851 743 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 SNORD125-201ENST00000459538 96 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 RN7SL51P-201ENST00000468230 285 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 RN7SL629P-201ENST00000489622 285 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 RPS4XP14-201ENST00000493072 781 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 HMGB1P3-201ENST00000502802 616 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC027026.1-201ENST00000532323 742 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 FKBP1AP1-201ENST00000594588 318 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC018809.2-201ENST00000602436 3823 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AL096803.3-201ENST00000609032 532 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC007786.3-201ENST00000615154 596 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 MIR6837-201ENST00000620884 64 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 AC020923.1-201ENST00000624021 917 ntBASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX30Q5VWJ9 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 SNORD51.1-201ENST00000365405 77 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 HMGB3P7-201ENST00000400214 611 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC096921.1-201ENST00000411661 375 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 RPL26P37-201ENST00000411983 438 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 GNG5P5-201ENST00000420444 220 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AL136231.1-201ENST00000429407 730 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 TMEM183AP1-205ENST00000432739 290 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 FTLP19-201ENST00000433300 394 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 HMGB1P46-201ENST00000520062 610 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC006363.1-201ENST00000603806 463 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AL023583.1-201ENST00000607518 1143 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AL451049.1-201ENST00000608672 497 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC005840.5-201ENST00000619166 599 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC138965.3-201ENST00000623875 498 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 AC006453.5-201ENST00000636451 619 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 MT-RNR2-201ENST00000387347 1559 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.79□□□□□ -1.48
SNX30Q5VWJ9 HSPA8P14-201ENST00000552265 1805 ntBASIC5.78□□□□□ -1.48
SNX30Q5VWJ9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
SNX30Q5VWJ9 AC144833.1-201ENST00000567953 4089 ntBASIC5.78□□□□□ -1.48
SNX30Q5VWJ9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX30Q5VWJ9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX30Q5VWJ9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
SNX30Q5VWJ9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms