Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RPL21P108-201ENST00000413857 481 ntBASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AC009237.10-201ENST00000414112 510 ntBASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AC009237.5-201ENST00000414271 501 ntBASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AC108751.3-201ENST00000461814 1020 ntBASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AC008782.1-201ENST00000603386 430 ntBASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AL355488.2-201ENST00000609909 2850 ntBASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNAPC4Q5SXM2 AP000756.2-201ENST00000624168 2567 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 NCLP2-201ENST00000416078 1462 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC079298.1-201ENST00000625026 1619 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC009779.8-201ENST00000641684 4384 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 RPL32P23-201ENST00000397237 405 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 RAD23BP1-201ENST00000421404 1227 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 TRGV7-201ENST00000427089 353 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC016831.4-201ENST00000438302 307 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 OR8G5-201ENST00000524943 1041 ntBASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNAPC4Q5SXM2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 AL449283.1-201ENST00000602631 3403 ntBASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 AL158073.1-201ENST00000426848 1104 ntBASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 RPL12P28-201ENST00000430852 489 ntBASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 MTND2P28-201ENST00000457540 1044 ntBASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 RPL7AP52-201ENST00000458096 790 ntBASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 RPL7AP10-201ENST00000481016 791 ntBASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNAPC4Q5SXM2 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AL122126.1-201ENST00000546905 1318 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 NDUFB4P8-201ENST00000435351 367 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AC000111.2-201ENST00000448200 210 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 RPSAP51-201ENST00000497462 645 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AC020593.1-201ENST00000507399 299 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 HMGN1P9-201ENST00000515212 298 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AC007224.1-201ENST00000564410 144 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 MIR4429-201ENST00000580105 73 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AC093227.2-201ENST00000589357 285 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 AP001267.4-201ENST00000602598 545 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 OR8B1P-202ENST00000641132 1178 ntBASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNAPC4Q5SXM2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.15□□□□□ -1.11
SNAPC4Q5SXM2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.15□□□□□ -1.11
SNAPC4Q5SXM2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.14□□□□□ -1.11
SNAPC4Q5SXM2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNAPC4Q5SXM2 MSL3P1-202ENST00000440028 1468 ntBASIC8.14□□□□□ -1.11
SNAPC4Q5SXM2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SNAPC4Q5SXM2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 2597.3 ms