Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORA7B-201ENST00000384360 139 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 Y_RNA.562-201ENST00000384695 113 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 MIR514A2-201ENST00000385131 88 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 MIR514A3-201ENST00000385132 88 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 RNA5SP185-201ENST00000390963 114 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 SSXP10-201ENST00000402595 565 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 RNU2-38P-201ENST00000410856 79 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL358942.1-201ENST00000418595 1178 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL138479.1-201ENST00000426913 484 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC000362.1-201ENST00000433725 425 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 RPSAP49-201ENST00000445182 886 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL136380.1-201ENST00000447970 162 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 HIST1H2APS6-201ENST00000448609 364 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 MTCO1P42-201ENST00000457379 726 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 RN7SL335P-201ENST00000482790 304 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 H3F3AP3-201ENST00000497682 407 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 RPL39P5-202ENST00000512505 151 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 Y_RNA.661-201ENST00000516003 99 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 RPL7P20-201ENST00000520308 745 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC022360.1-201ENST00000521058 340 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AP002770.2-201ENST00000543613 532 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 MIR544B-201ENST00000582372 78 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC125232.2-201ENST00000592457 143 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL670379.11-201ENST00000604059 253 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL670379.10-201ENST00000604330 253 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL670379.12-201ENST00000605291 253 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL670379.9-201ENST00000605428 253 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARS2Q5ST30 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VARS2Q5ST30 BRD7P1-201ENST00000557705 1915 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC013488.1-201ENST00000526618 1838 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AL121936.1-201ENST00000641660 2884 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 RNA5SP389-201ENST00000362610 115 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RNA5SP226-201ENST00000362653 115 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RN7SKP208-201ENST00000365474 361 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 RNU6-310P-201ENST00000384655 107 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AL034403.1-201ENST00000399414 885 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AL353151.1-201ENST00000402406 604 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 RNU6-954P-201ENST00000411355 107 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 GJA6P-201ENST00000415117 1042 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 TMBIM7P-201ENST00000418074 855 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC8.35□□□□□ -1.07
VARS2Q5ST30 FO393419.3-201ENST00000428741 282 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 BRWD1P3-201ENST00000428816 390 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AC009299.1-201ENST00000429684 717 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARS2Q5ST30 YWHAZP8-201ENST00000436935 731 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 AL731892.1-201ENST00000437364 1192 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RPS15AP9-201ENST00000439856 381 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 DYNLT3P2-201ENST00000442517 295 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 OSTCP8-201ENST00000445117 448 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 GSTA11P-201ENST00000452866 669 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 MTND4LP30-201ENST00000454092 297 ntBASIC8.35□□□□□ -1.07
VARS2Q5ST30 RANP1-206ENST00000455094 651 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 498.5 ms