Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AL450326.2-201ENST00000421913 1962 ntBASIC4.96□□□□□ -1.61
SCN1BQ07699 AL731532.2-201ENST00000623542 1953 ntBASIC4.96□□□□□ -1.61
SCN1BQ07699 AL034549.2-201ENST00000618285 3373 ntBASIC4.96□□□□□ -1.61
SCN1BQ07699 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
SCN1BQ07699 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SCN1BQ07699 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN1BQ07699 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 RAD1P1-201ENST00000231383 813 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN1BQ07699 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SCN1BQ07699 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN1BQ07699 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN1BQ07699 AC007618.1-201ENST00000366455 732 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 SNORA48.4-201ENST00000391089 134 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 RNF10P1-201ENST00000418589 369 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AC073464.3-201ENST00000422564 712 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN1BQ07699 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN1BQ07699 TMEM183AP1-205ENST00000432739 290 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 AC006326.1-201ENST00000445465 787 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN1BQ07699 PTMAP3-201ENST00000447474 330 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 RNA5SP103-201ENST00000459503 118 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 AC108729.2-201ENST00000476543 840 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 RPL5P22-201ENST00000480199 884 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN1BQ07699 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN1BQ07699 COL6A4P2-205ENST00000509855 506 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 MTND2P31-201ENST00000512602 616 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 SETP12-201ENST00000514068 805 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN1BQ07699 RN7SKP238-201ENST00000516483 249 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN1BQ07699 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.96□□□□□ -1.62
SCN1BQ07699 AC018552.3-201ENST00000567416 561 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 MIR3154-201ENST00000577829 84 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AC138207.8-204ENST00000579588 527 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN1BQ07699 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.96□□□□□ -1.62
SCN1BQ07699 AC006272.2-201ENST00000594725 163 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN1BQ07699 PSMA6P4-201ENST00000603247 718 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AC055764.2-201ENST00000610089 670 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AC004801.6-201ENST00000616571 978 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 AC090617.9-201ENST00000623751 147 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SCN1BQ07699 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN1BQ07699 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
SCN1BQ07699 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
SCN1BQ07699 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 AP001642.1-201ENST00000624727 2117 ntBASIC4.96□□□□□ -1.62
SCN1BQ07699 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN1BQ07699 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN1BQ07699 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SCN1BQ07699 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AC007996.1-201ENST00000620414 2821 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SCN1BQ07699 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SCN1BQ07699 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SCN1BQ07699 RNA5SP198-201ENST00000410376 127 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 RN7SKP86-201ENST00000410454 332 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 PCNPP4-201ENST00000414817 517 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 AL445928.1-201ENST00000435545 222 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AC092013.1-201ENST00000438795 332 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 ATP5LP2-201ENST00000440646 311 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 RPL5P7-201ENST00000444235 813 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 PRPF38AP1-201ENST00000451976 933 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 CCDC75P1-201ENST00000469247 791 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 RN7SL188P-201ENST00000469842 285 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 AC092865.4-201ENST00000477936 615 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 SYT14P1-201ENST00000481459 721 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 AC008410.1-201ENST00000483777 339 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AL158068.1-201ENST00000506116 616 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.95□□□□□ -1.62
SCN1BQ07699 RN7SKP35-201ENST00000517210 151 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 AC027369.2-201ENST00000528030 440 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AC122688.1-201ENST00000541494 223 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms