Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AP000662.1-201ENST00000530952 487 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 AC084121.1-201ENST00000533882 835 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 FGF7P1-201ENST00000582820 288 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC068276.1-201ENST00000605793 379 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 RPSAP75-201ENST00000605848 301 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 AL021368.3-201ENST00000607119 578 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 AL159169.3-201ENST00000608871 561 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 AC062022.1-201ENST00000451026 1684 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX4Q06945 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX4Q06945 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 AL589993.1-201ENST00000407450 2524 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.91□□□□□ -1.3
SOX4Q06945 ZNF812P-201ENST00000457674 1694 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX4Q06945 AC061975.7-201ENST00000592016 2692 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX4Q06945 AKAP17BP-201ENST00000431706 2719 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SOX4Q06945 FGF7P2-201ENST00000332473 296 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 Y_RNA.61-201ENST00000362835 102 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 RNU6-253P-201ENST00000384730 105 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 TAF9BP1-201ENST00000396646 746 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 RN7SKP108-201ENST00000411367 328 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX4Q06945 OR51A5P-201ENST00000415429 942 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC245054.1-201ENST00000420944 258 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX4Q06945 USP12PX-201ENST00000432383 1057 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX4Q06945 AC003989.1-201ENST00000434569 565 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 RPSAP40-201ENST00000442343 891 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC093166.3-201ENST00000448785 303 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.91□□□□□ -1.3
SOX4Q06945 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 RPSAP39-201ENST00000467439 883 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC090589.1-201ENST00000473109 362 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC122718.2-201ENST00000505325 591 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX4Q06945 AC011853.1-201ENST00000518911 454 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 SMARCE1P4-201ENST00000523647 241 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 IGLV3-6-201ENST00000523937 250 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.91□□□□□ -1.3
SOX4Q06945 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX4Q06945 AC104383.1-201ENST00000530297 370 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 GLYCAM1-201ENST00000546596 285 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX4Q06945 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 BNIP3P26-201ENST00000600827 554 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 BMS1P7-201ENST00000602440 1052 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.91□□□□□ -1.3
SOX4Q06945 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 AC012150.2-201ENST00000621300 544 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 MTND1P37-201ENST00000636562 264 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 RPS4XP5-202ENST00000449995 1334 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SOX4Q06945 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX4Q06945 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 ELF2P3-201ENST00000445099 1506 ntBASIC6.91□□□□□ -1.3
SOX4Q06945 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX4Q06945 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX4Q06945 MTND5P17-201ENST00000418405 1603 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms