Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 SNORA70H-201ENST00000383910 135 ntBASIC3□□□□□ -1.93
HSPG2P98160 SNORA70J-201ENST00000384182 135 ntBASIC3□□□□□ -1.93
HSPG2P98160 ARL4AP4-201ENST00000434170 518 ntBASIC3□□□□□ -1.93
HSPG2P98160 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 AL117378.2-201ENST00000622916 1337 ntBASIC3□□□□□ -1.93
HSPG2P98160 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC3□□□□□ -1.93
HSPG2P98160 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3□□□□□ -1.93
HSPG2P98160 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3□□□□□ -1.93
HSPG2P98160 RNU1-130P-201ENST00000363930 160 ntBASIC3□□□□□ -1.93
HSPG2P98160 AL022722.2-201ENST00000402519 180 ntBASIC3□□□□□ -1.93
HSPG2P98160 AL136116.2-201ENST00000404020 785 ntBASIC3□□□□□ -1.93
HSPG2P98160 AL356387.2-201ENST00000422272 243 ntBASIC3□□□□□ -1.93
HSPG2P98160 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 VN1R105P-201ENST00000486595 910 ntBASIC3□□□□□ -1.93
HSPG2P98160 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 SOD1P3-201ENST00000518682 454 ntBASIC3□□□□□ -1.93
HSPG2P98160 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3□□□□□ -1.93
HSPG2P98160 AL139254.3-201ENST00000641097 674 ntBASIC3□□□□□ -1.93
HSPG2P98160 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 AP000756.2-201ENST00000624168 2567 ntBASIC3□□□□□ -1.93
HSPG2P98160 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HSPG2P98160 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 AC079298.1-201ENST00000625026 1619 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 NDUFB4P8-201ENST00000435351 367 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 AC079168.2-201ENST00000453977 416 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 BUD31P1-201ENST00000521828 359 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC011626.1-201ENST00000604710 562 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 H3F3BP1-201ENST00000440551 403 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 RNU1-88P-201ENST00000459274 128 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 AC016550.3-201ENST00000515706 767 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC004836.1-201ENST00000623032 634 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HSPG2P98160 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 MAX-203ENST00000341653 330 ntTSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 TPT1P3-201ENST00000492841 512 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC015795.1-201ENST00000513669 327 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms