Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.26□□□□□ -1.57
FDFT1P37268 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
FDFT1P37268 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 AC020978.7-201ENST00000575953 1187 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 AC069307.1-201ENST00000602820 447 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 AL451049.1-201ENST00000608672 497 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.26□□□□□ -1.57
FDFT1P37268 AC015660.5-201ENST00000623238 564 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.26□□□□□ -1.57
FDFT1P37268 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.26□□□□□ -1.57
FDFT1P37268 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
FDFT1P37268 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
FDFT1P37268 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.26□□□□□ -1.57
FDFT1P37268 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 AC100778.3-201ENST00000580060 1750 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
FDFT1P37268 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
FDFT1P37268 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
FDFT1P37268 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
FDFT1P37268 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
FDFT1P37268 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.25□□□□□ -1.57
FDFT1P37268 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
FDFT1P37268 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
FDFT1P37268 AL731566.1-201ENST00000620490 1937 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 MTND5P23-201ENST00000430812 1655 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 SCARNA15-201ENST00000607520 4325 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
FDFT1P37268 MIR143-201ENST00000385300 106 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.25□□□□□ -1.57
FDFT1P37268 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.25□□□□□ -1.57
FDFT1P37268 HSPE1P16-201ENST00000426640 348 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AL139148.1-201ENST00000427122 680 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 GAPDHP34-201ENST00000432112 823 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 RPL34P6-201ENST00000432390 345 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.25□□□□□ -1.57
FDFT1P37268 RPS26P41-201ENST00000450370 284 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC007386.1-201ENST00000455212 582 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC023141.9-201ENST00000458734 412 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC091180.1-201ENST00000462104 372 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC020779.1-201ENST00000478757 796 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC015864.1-201ENST00000496512 544 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC105031.1-201ENST00000518550 476 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.25□□□□□ -1.57
FDFT1P37268 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.25□□□□□ -1.57
FDFT1P37268 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.25□□□□□ -1.57
FDFT1P37268 AL713998.2-201ENST00000604538 1198 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.25□□□□□ -1.57
FDFT1P37268 AC096586.2-201ENST00000610260 441 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AL359513.1-201ENST00000614364 557 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 AL356752.1-201ENST00000615844 593 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.25□□□□□ -1.57
FDFT1P37268 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 AC093591.2-201ENST00000565254 3843 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FDFT1P37268 SMG1P4-204ENST00000523028 4131 ntBASIC5.25□□□□□ -1.57
FDFT1P37268 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.25□□□□□ -1.57
FDFT1P37268 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 AC093849.1-201ENST00000563631 2209 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 CUL4AP1-201ENST00000514750 1863 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
FDFT1P37268 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FDFT1P37268 RNA5SP132-201ENST00000364725 118 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FDFT1P37268 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.24□□□□□ -1.57
FDFT1P37268 AL589994.1-201ENST00000404962 340 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 U3.32-201ENST00000408116 212 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 MIR1182-201ENST00000408363 97 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.24□□□□□ -1.57
FDFT1P37268 PTP4A1P1-201ENST00000420539 515 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 EI24P4-201ENST00000423683 1078 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 NANOGP4-201ENST00000427230 913 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms