Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC005341.1-201ENST00000571086 708 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.82□□□□□ -1.64
SHC1P29353 RPL21P136-201ENST00000605378 396 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.82□□□□□ -1.64
SHC1P29353 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHC1P29353 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.82□□□□□ -1.64
SHC1P29353 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.82□□□□□ -1.64
SHC1P29353 CASC19-264ENST00000641912 1184 ntBASIC4.82□□□□□ -1.64
SHC1P29353 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHC1P29353 AC004817.4-201ENST00000602396 3625 ntBASIC4.82□□□□□ -1.64
SHC1P29353 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHC1P29353 AC104623.2-202ENST00000623477 4002 ntBASIC4.82□□□□□ -1.64
SHC1P29353 AC114947.2-201ENST00000565748 2125 ntBASIC4.82□□□□□ -1.64
SHC1P29353 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SHC1P29353 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SHC1P29353 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SHC1P29353 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
SHC1P29353 AC020633.1-201ENST00000468439 2247 ntBASIC4.81□□□□□ -1.64
SHC1P29353 TRIM51GP-201ENST00000534741 1350 ntBASIC4.81□□□□□ -1.64
SHC1P29353 CASC19-255ENST00000641733 1385 ntBASIC4.81□□□□□ -1.64
SHC1P29353 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 AC233968.1-201ENST00000611212 1300 ntBASIC4.81□□□□□ -1.64
SHC1P29353 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHC1P29353 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHC1P29353 RNU1-149P-201ENST00000390870 161 ntBASIC4.81□□□□□ -1.64
SHC1P29353 SNORA48.4-201ENST00000391089 134 ntBASIC4.81□□□□□ -1.64
SHC1P29353 RPL21P67-201ENST00000402896 478 ntBASIC4.81□□□□□ -1.64
SHC1P29353 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.81□□□□□ -1.64
SHC1P29353 AC013268.2-201ENST00000420753 337 ntBASIC4.81□□□□□ -1.64
SHC1P29353 SEC63P1-201ENST00000425785 1258 ntBASIC4.81□□□□□ -1.64
SHC1P29353 GAPDHP25-201ENST00000447061 1001 ntBASIC4.81□□□□□ -1.64
SHC1P29353 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.81□□□□□ -1.64
SHC1P29353 AL513343.1-201ENST00000451818 792 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC018638.3-201ENST00000461273 132 ntBASIC4.81□□□□□ -1.64
SHC1P29353 COPS8P2-201ENST00000473228 627 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AP000797.2-201ENST00000475768 606 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC093827.1-201ENST00000480094 861 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC023424.1-201ENST00000496058 459 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC024558.1-201ENST00000505008 528 ntBASIC4.81□□□□□ -1.64
SHC1P29353 RN7SKP5-201ENST00000517045 272 ntBASIC4.81□□□□□ -1.64
SHC1P29353 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 AC100784.1-201ENST00000522790 310 ntBASIC4.81□□□□□ -1.64
SHC1P29353 YWHABP2-201ENST00000540201 713 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 AC127381.1-201ENST00000555979 939 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.81□□□□□ -1.64
SHC1P29353 AC122134.1-202ENST00000569111 1201 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC245128.3-201ENST00000594721 748 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC009027.1-201ENST00000604510 479 ntBASIC4.81□□□□□ -1.64
SHC1P29353 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.81□□□□□ -1.64
SHC1P29353 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 AC104820.1-201ENST00000624183 307 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AP001002.2-201ENST00000625137 386 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHC1P29353 SAMMSON-209ENST00000641222 1100 ntBASIC4.81□□□□□ -1.64
SHC1P29353 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.81□□□□□ -1.64
SHC1P29353 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.81□□□□□ -1.64
SHC1P29353 OR55B1P-203ENST00000641518 2602 ntBASIC4.81□□□□□ -1.64
SHC1P29353 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.81□□□□□ -1.64
SHC1P29353 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHC1P29353 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AC235565.1-201ENST00000456962 1325 ntBASIC4.8□□□□□ -1.64
SHC1P29353 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 RNA5SP487-201ENST00000410186 122 ntBASIC4.8□□□□□ -1.64
SHC1P29353 CBX1P3-201ENST00000413296 527 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.8□□□□□ -1.64
SHC1P29353 GTF3AP1-201ENST00000416942 1004 ntBASIC4.8□□□□□ -1.64
SHC1P29353 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.8□□□□□ -1.64
SHC1P29353 FAM96AP1-201ENST00000430879 482 ntBASIC4.8□□□□□ -1.64
SHC1P29353 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.8□□□□□ -1.64
SHC1P29353 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.8□□□□□ -1.64
SHC1P29353 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.8□□□□□ -1.64
SHC1P29353 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.8□□□□□ -1.64
SHC1P29353 RN7SL423P-201ENST00000486202 304 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.8□□□□□ -1.64
SHC1P29353 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.8□□□□□ -1.64
SHC1P29353 ADAD1P2-201ENST00000588476 646 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AC092474.3-201ENST00000603022 568 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AC138473.1-201ENST00000605717 526 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms