Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC114546.4-201ENST00000624413 369 ntBASIC5.67□□□□□ -1.5
CD40P25942 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 AC090582.1-201ENST00000636321 199 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC010325.3-201ENST00000641084 394 ntBASIC5.67□□□□□ -1.5
CD40P25942 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.67□□□□□ -1.5
CD40P25942 LINC01613-201ENST00000561476 2780 ntBASIC5.67□□□□□ -1.5
CD40P25942 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CD40P25942 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 AL353743.4-201ENST00000422653 1547 ntBASIC5.67□□□□□ -1.5
CD40P25942 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 AC092111.1-201ENST00000618256 3358 ntBASIC5.67□□□□□ -1.5
CD40P25942 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 AC092725.2-201ENST00000567658 1389 ntBASIC5.67□□□□□ -1.5
CD40P25942 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 AC073429.2-201ENST00000569694 1444 ntBASIC5.66□□□□□ -1.5
CD40P25942 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 AC007485.2-201ENST00000623493 1667 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 AC119744.1-201ENST00000454746 1715 ntBASIC5.66□□□□□ -1.5
CD40P25942 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 AC068870.3-201ENST00000625077 2536 ntBASIC5.66□□□□□ -1.5
CD40P25942 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 KARSP3-201ENST00000571212 1504 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 SNORA4.1-201ENST00000364263 144 ntBASIC5.66□□□□□ -1.5
CD40P25942 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD40P25942 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD40P25942 TMSB4XP8-201ENST00000402089 135 ntBASIC5.66□□□□□ -1.5
CD40P25942 RPL23AP47-201ENST00000408017 460 ntBASIC5.66□□□□□ -1.5
CD40P25942 TMSB4XP6-201ENST00000415187 135 ntBASIC5.66□□□□□ -1.5
CD40P25942 TMSB4XP1-201ENST00000424567 135 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL139158.1-201ENST00000424719 340 ntBASIC5.66□□□□□ -1.5
CD40P25942 AKR1B10P1-201ENST00000425765 942 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AC073069.1-201ENST00000428657 441 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 USP9YP14-201ENST00000430663 563 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC008072.1-201ENST00000434254 824 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 ZNF619P1-201ENST00000446539 752 ntBASIC5.66□□□□□ -1.5
CD40P25942 RPL7P59-201ENST00000447700 943 ntBASIC5.66□□□□□ -1.5
CD40P25942 EEF1B2P3-201ENST00000447718 678 ntBASIC5.66□□□□□ -1.5
CD40P25942 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 DDX39BP2-208ENST00000453923 258 ntBASIC5.66□□□□□ -1.5
CD40P25942 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 HMGB1P4-201ENST00000455362 567 ntBASIC5.66□□□□□ -1.5
CD40P25942 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AL024509.2-201ENST00000493462 493 ntBASIC5.66□□□□□ -1.5
CD40P25942 H3F3AP3-201ENST00000497682 407 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC104685.1-201ENST00000502445 371 ntBASIC5.66□□□□□ -1.5
CD40P25942 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
CD40P25942 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 AC018645.1-201ENST00000505003 109 ntBASIC5.66□□□□□ -1.5
CD40P25942 ATP1B1P1-201ENST00000509767 915 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC010625.1-201ENST00000511296 403 ntBASIC5.66□□□□□ -1.5
CD40P25942 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 SNORA74.1-201ENST00000516320 180 ntBASIC5.66□□□□□ -1.5
CD40P25942 RNA5SP135-201ENST00000517019 125 ntBASIC5.66□□□□□ -1.5
CD40P25942 IGLVIV-64-201ENST00000518581 301 ntBASIC5.66□□□□□ -1.5
CD40P25942 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AC018442.3-201ENST00000523025 183 ntBASIC5.66□□□□□ -1.5
CD40P25942 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 OR52K3P-201ENST00000531655 943 ntBASIC5.66□□□□□ -1.5
CD40P25942 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.66□□□□□ -1.5
CD40P25942 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD40P25942 AC023310.2-201ENST00000553844 547 ntBASIC5.66□□□□□ -1.5
CD40P25942 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.66□□□□□ -1.5
CD40P25942 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.66□□□□□ -1.5
CD40P25942 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.66□□□□□ -1.5
CD40P25942 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms