Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 OR56A4-201ENST00000330728 1209 ntBASIC5.65□□□□□ -1.5
TPM1P09493 RNA5SP319-201ENST00000362768 119 ntBASIC5.65□□□□□ -1.5
TPM1P09493 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TPM1P09493 RNA5SP122-201ENST00000384457 108 ntBASIC5.65□□□□□ -1.5
TPM1P09493 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TPM1P09493 OR6E1P-201ENST00000414424 923 ntBASIC5.65□□□□□ -1.5
TPM1P09493 EIF4A1P1-201ENST00000420241 934 ntBASIC5.65□□□□□ -1.5
TPM1P09493 PTP4A1P1-201ENST00000420539 515 ntBASIC5.65□□□□□ -1.5
TPM1P09493 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM1P09493 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TPM1P09493 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM1P09493 RPS29P10-201ENST00000439197 166 ntBASIC5.65□□□□□ -1.5
TPM1P09493 SNRPFP2-201ENST00000440710 251 ntBASIC5.65□□□□□ -1.5
TPM1P09493 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.65□□□□□ -1.5
TPM1P09493 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TPM1P09493 AC073073.1-201ENST00000493920 463 ntBASIC5.65□□□□□ -1.5
TPM1P09493 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM1P09493 KCTD9P6-201ENST00000522306 950 ntBASIC5.65□□□□□ -1.5
TPM1P09493 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM1P09493 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
TPM1P09493 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM1P09493 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM1P09493 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM1P09493 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM1P09493 AL138895.2-201ENST00000603019 178 ntBASIC5.65□□□□□ -1.5
TPM1P09493 RNF138P2-201ENST00000603490 592 ntBASIC5.65□□□□□ -1.5
TPM1P09493 SNORD91B-202ENST00000608459 222 ntBASIC5.65□□□□□ -1.5
TPM1P09493 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM1P09493 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM1P09493 AC073575.2-201ENST00000614212 627 ntBASIC5.65□□□□□ -1.5
TPM1P09493 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TPM1P09493 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM1P09493 HSPA8P18-201ENST00000439846 1928 ntBASIC5.65□□□□□ -1.51
TPM1P09493 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
TPM1P09493 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.65□□□□□ -1.51
TPM1P09493 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TPM1P09493 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TPM1P09493 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.65□□□□□ -1.51
TPM1P09493 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.65□□□□□ -1.51
TPM1P09493 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
TPM1P09493 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 RN7SKP275-201ENST00000364626 301 ntBASIC5.64□□□□□ -1.51
TPM1P09493 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TPM1P09493 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TPM1P09493 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.64□□□□□ -1.51
TPM1P09493 AC093155.2-201ENST00000420734 937 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 AL139148.1-201ENST00000427122 680 ntBASIC5.64□□□□□ -1.51
TPM1P09493 CDY8P-201ENST00000428380 1279 ntBASIC5.64□□□□□ -1.51
TPM1P09493 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.64□□□□□ -1.51
TPM1P09493 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.64□□□□□ -1.51
TPM1P09493 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 CDY20P-201ENST00000447528 1279 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TPM1P09493 AL445433.1-201ENST00000457507 257 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC011225.1-201ENST00000457751 369 ntBASIC5.64□□□□□ -1.51
TPM1P09493 RPL21P6-201ENST00000479171 504 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC090686.1-201ENST00000481577 749 ntBASIC5.64□□□□□ -1.51
TPM1P09493 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.64□□□□□ -1.51
TPM1P09493 ARL4AP1-201ENST00000503220 705 ntBASIC5.64□□□□□ -1.51
TPM1P09493 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 AC097173.1-201ENST00000505862 819 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.64□□□□□ -1.51
TPM1P09493 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 AC006499.4-201ENST00000510947 694 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 RNA5SP464-201ENST00000516251 108 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC012400.1-201ENST00000518452 381 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TPM1P09493 NDUFB4P11-201ENST00000560510 395 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AGGF1P9-201ENST00000561884 913 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC015720.2-201ENST00000567709 334 ntBASIC5.64□□□□□ -1.51
TPM1P09493 MIR7109-201ENST00000613748 65 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC010809.3-201ENST00000621310 641 ntBASIC5.64□□□□□ -1.51
TPM1P09493 AC073593.1-201ENST00000624500 411 ntBASIC5.64□□□□□ -1.51
TPM1P09493 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.64□□□□□ -1.51
TPM1P09493 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 AL513548.1-201ENST00000562904 1724 ntBASIC5.64□□□□□ -1.51
TPM1P09493 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.64□□□□□ -1.51
TPM1P09493 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TPM1P09493 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TPM1P09493 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.64□□□□□ -1.51
TPM1P09493 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM1P09493 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM1P09493 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms