Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RB1P06400 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RB1P06400 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.8□□□□□ -1.48
RB1P06400 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RB1P06400 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RB1P06400 AC005725.1-201ENST00000577346 2607 ntBASIC5.79□□□□□ -1.48
RB1P06400 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 AP005432.1-201ENST00000580891 3485 ntBASIC5.79□□□□□ -1.48
RB1P06400 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RB1P06400 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 AL672167.2-201ENST00000377164 879 ntBASIC5.79□□□□□ -1.48
RB1P06400 SNORA51.8-201ENST00000384234 132 ntBASIC5.79□□□□□ -1.48
RB1P06400 RPL11P3-201ENST00000395256 523 ntBASIC5.79□□□□□ -1.48
RB1P06400 RN7SKP126-201ENST00000411143 300 ntBASIC5.79□□□□□ -1.48
RB1P06400 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.79□□□□□ -1.48
RB1P06400 AC245028.1-201ENST00000423259 256 ntBASIC5.79□□□□□ -1.48
RB1P06400 USP9YP9-201ENST00000429406 715 ntBASIC5.79□□□□□ -1.48
RB1P06400 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 RPL21P133-201ENST00000443666 476 ntBASIC5.79□□□□□ -1.48
RB1P06400 AC239798.3-201ENST00000454459 408 ntBASIC5.79□□□□□ -1.48
RB1P06400 RPS3AP53-201ENST00000454716 778 ntBASIC5.79□□□□□ -1.48
RB1P06400 SEPT7P3-201ENST00000455017 621 ntBASIC5.79□□□□□ -1.48
RB1P06400 Z92846.1-201ENST00000456203 268 ntBASIC5.79□□□□□ -1.48
RB1P06400 AC092324.1-201ENST00000468671 324 ntBASIC5.79□□□□□ -1.48
RB1P06400 RPL7P40-201ENST00000481703 745 ntBASIC5.79□□□□□ -1.48
RB1P06400 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 AC105233.1-201ENST00000498840 781 ntBASIC5.79□□□□□ -1.48
RB1P06400 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.79□□□□□ -1.48
RB1P06400 PCNAP1-201ENST00000505363 709 ntBASIC5.79□□□□□ -1.48
RB1P06400 AC004980.4-201ENST00000513375 203 ntBASIC5.79□□□□□ -1.48
RB1P06400 RNU6-491P-201ENST00000516099 110 ntBASIC5.79□□□□□ -1.48
RB1P06400 snoU109.5-201ENST00000516231 132 ntBASIC5.79□□□□□ -1.48
RB1P06400 AC026688.1-201ENST00000520639 1168 ntBASIC5.79□□□□□ -1.48
RB1P06400 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.79□□□□□ -1.48
RB1P06400 OR4V1P-201ENST00000525394 1140 ntBASIC5.79□□□□□ -1.48
RB1P06400 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 EDDM3DP-201ENST00000554692 434 ntBASIC5.79□□□□□ -1.48
RB1P06400 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
RB1P06400 MIR4330-201ENST00000579077 105 ntBASIC5.79□□□□□ -1.48
RB1P06400 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 EIF3FP1-201ENST00000613970 806 ntBASIC5.79□□□□□ -1.48
RB1P06400 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 AC091948.2-201ENST00000636510 279 ntBASIC5.79□□□□□ -1.48
RB1P06400 AL163152.1-201ENST00000642001 374 ntBASIC5.79□□□□□ -1.48
RB1P06400 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
RB1P06400 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.79□□□□□ -1.48
RB1P06400 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 INTS6P1-201ENST00000504674 2530 ntBASIC5.79□□□□□ -1.48
RB1P06400 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RB1P06400 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RB1P06400 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.78□□□□□ -1.48
RB1P06400 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RB1P06400 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RB1P06400 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RB1P06400 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RB1P06400 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RB1P06400 MIR141-201ENST00000384975 95 ntBASIC5.78□□□□□ -1.48
RB1P06400 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RB1P06400 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RB1P06400 RPL26P29-201ENST00000415623 438 ntBASIC5.78□□□□□ -1.48
RB1P06400 AC073410.1-201ENST00000435125 589 ntBASIC5.78□□□□□ -1.48
RB1P06400 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.78□□□□□ -1.48
RB1P06400 CCRL1P1-201ENST00000449542 1053 ntBASIC5.78□□□□□ -1.48
RB1P06400 TPT1P13-201ENST00000449760 499 ntBASIC5.78□□□□□ -1.48
RB1P06400 AC009220.1-201ENST00000451614 275 ntBASIC5.78□□□□□ -1.48
RB1P06400 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.78□□□□□ -1.48
RB1P06400 RSU1P1-201ENST00000453416 441 ntBASIC5.78□□□□□ -1.48
RB1P06400 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.78□□□□□ -1.48
RB1P06400 AC009127.1-201ENST00000467090 155 ntBASIC5.78□□□□□ -1.48
RB1P06400 AC098583.1-201ENST00000480875 255 ntBASIC5.78□□□□□ -1.48
RB1P06400 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.78□□□□□ -1.48
RB1P06400 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.78□□□□□ -1.48
RB1P06400 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
RB1P06400 AC018809.2-201ENST00000602436 3823 ntBASIC5.78□□□□□ -1.48
RB1P06400 LINC00216-201ENST00000623548 1126 ntBASIC5.78□□□□□ -1.48
RB1P06400 THAP12P4-201ENST00000528321 2266 ntBASIC5.78□□□□□ -1.48
RB1P06400 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms