Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
MYCNP04198 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MYCNP04198 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MYCNP04198 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MYCNP04198 Y_RNA.269-201ENST00000364685 89 ntBASIC10.19□□□□□ -0.78
MYCNP04198 RNU6-81P-201ENST00000365608 104 ntBASIC10.19□□□□□ -0.78
MYCNP04198 RNU6-842P-201ENST00000384269 107 ntBASIC10.19□□□□□ -0.78
MYCNP04198 RNU6-1156P-201ENST00000410365 100 ntBASIC10.19□□□□□ -0.78
MYCNP04198 RNU6-1203P-201ENST00000410703 110 ntBASIC10.19□□□□□ -0.78
MYCNP04198 AC114491.1-201ENST00000416095 246 ntBASIC10.19□□□□□ -0.78
MYCNP04198 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 AL135924.2-201ENST00000427901 361 ntTSL 3 BASIC10.19□□□□□ -0.78
MYCNP04198 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC10.19□□□□□ -0.78
MYCNP04198 RPL37P1-201ENST00000432310 284 ntBASIC10.19□□□□□ -0.78
MYCNP04198 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC10.19□□□□□ -0.78
MYCNP04198 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
MYCNP04198 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC10.19□□□□□ -0.78
MYCNP04198 RN7SL107P-201ENST00000478127 283 ntBASIC10.19□□□□□ -0.78
MYCNP04198 RPL7AP10-201ENST00000481016 791 ntBASIC10.19□□□□□ -0.78
MYCNP04198 AC021382.1-201ENST00000483523 359 ntBASIC10.19□□□□□ -0.78
MYCNP04198 RPL17P19-201ENST00000489069 552 ntBASIC10.19□□□□□ -0.78
MYCNP04198 RN7SL130P-201ENST00000489463 305 ntBASIC10.19□□□□□ -0.78
MYCNP04198 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
MYCNP04198 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 AC093816.1-201ENST00000515076 913 ntBASIC10.19□□□□□ -0.78
MYCNP04198 SNORA31.6-201ENST00000516241 130 ntBASIC10.19□□□□□ -0.78
MYCNP04198 AC022559.1-201ENST00000520905 205 ntBASIC10.19□□□□□ -0.78
MYCNP04198 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
MYCNP04198 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC10.19□□□□□ -0.78
MYCNP04198 MBP-228ENST00000527041 582 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC10.19□□□□□ -0.78
MYCNP04198 AC022880.2-201ENST00000532664 270 ntBASIC10.19□□□□□ -0.78
MYCNP04198 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC10.19□□□□□ -0.78
MYCNP04198 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC10.19□□□□□ -0.78
MYCNP04198 AC018737.1-201ENST00000603900 204 ntBASIC10.19□□□□□ -0.78
MYCNP04198 AC002044.1-201ENST00000606707 158 ntBASIC10.19□□□□□ -0.78
MYCNP04198 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC10.19□□□□□ -0.78
MYCNP04198 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 AL118508.2-201ENST00000622708 673 ntTSL 3 BASIC10.19□□□□□ -0.78
MYCNP04198 ALG13-226ENST00000622986 582 ntTSL 2 BASIC10.19□□□□□ -0.78
MYCNP04198 AC007998.4-201ENST00000612496 2533 ntBASIC10.19□□□□□ -0.78
MYCNP04198 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC10.19□□□□□ -0.78
MYCNP04198 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC10.19□□□□□ -0.78
MYCNP04198 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
MYCNP04198 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC10.19□□□□□ -0.78
MYCNP04198 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MYCNP04198 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
MYCNP04198 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC10.19□□□□□ -0.78
MYCNP04198 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC10.18□□□□□ -0.78
MYCNP04198 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
MYCNP04198 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC10.18□□□□□ -0.78
MYCNP04198 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 AC008522.1-201ENST00000639479 2906 ntBASIC10.18□□□□□ -0.78
MYCNP04198 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC10.18□□□□□ -0.78
MYCNP04198 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC10.18□□□□□ -0.78
MYCNP04198 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
MYCNP04198 Y_RNA.237-201ENST00000364439 102 ntBASIC10.18□□□□□ -0.78
MYCNP04198 RIT1-201ENST00000368322 855 ntTSL 3 BASIC10.18□□□□□ -0.78
MYCNP04198 AC017104.2-201ENST00000417000 321 ntBASIC10.18□□□□□ -0.78
MYCNP04198 RPL31P45-201ENST00000419532 356 ntBASIC10.18□□□□□ -0.78
MYCNP04198 RPL21P109-201ENST00000422213 475 ntBASIC10.18□□□□□ -0.78
MYCNP04198 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC10.18□□□□□ -0.78
MYCNP04198 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC10.18□□□□□ -0.78
MYCNP04198 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC10.18□□□□□ -0.78
MYCNP04198 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC10.18□□□□□ -0.78
MYCNP04198 PPIAP28-201ENST00000458378 485 ntBASIC10.18□□□□□ -0.78
MYCNP04198 OR9A3P-202ENST00000485185 878 ntBASIC10.18□□□□□ -0.78
MYCNP04198 AC016559.2-201ENST00000510759 359 ntBASIC10.18□□□□□ -0.78
MYCNP04198 AC107393.1-201ENST00000512403 346 ntBASIC10.18□□□□□ -0.78
MYCNP04198 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC10.18□□□□□ -0.78
MYCNP04198 FABP5P7-201ENST00000524732 405 ntBASIC10.18□□□□□ -0.78
MYCNP04198 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC10.18□□□□□ -0.78
MYCNP04198 EIF4EBP1P1-201ENST00000557776 341 ntBASIC10.18□□□□□ -0.78
MYCNP04198 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC10.18□□□□□ -0.78
MYCNP04198 AC013565.2-201ENST00000564874 310 ntBASIC10.18□□□□□ -0.78
MYCNP04198 TMEM97-203ENST00000582113 493 ntTSL 2 BASIC10.18□□□□□ -0.78
MYCNP04198 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC10.18□□□□□ -0.78
MYCNP04198 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC10.18□□□□□ -0.78
MYCNP04198 AC233702.11-201ENST00000598588 333 ntBASIC10.18□□□□□ -0.78
MYCNP04198 AL390123.1-201ENST00000603216 237 ntBASIC10.18□□□□□ -0.78
MYCNP04198 AC025279.3-201ENST00000622398 104 ntBASIC10.18□□□□□ -0.78
MYCNP04198 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC10.18□□□□□ -0.78
MYCNP04198 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC10.18□□□□□ -0.78
MYCNP04198 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC10.18□□□□□ -0.78
MYCNP04198 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC10.18□□□□□ -0.78
MYCNP04198 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MYCNP04198 LRRC37A6P-202ENST00000448648 5444 ntBASIC10.18□□□□□ -0.78
MYCNP04198 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms