Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CASC19-280ENST00000642102 1351 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.8□□□□□ -1.32
PDGFAP04085 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.8□□□□□ -1.32
PDGFAP04085 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 NF1P8-201ENST00000415351 1461 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 MFSD8-218ENST00000641186 4448 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 OFD1P17-201ENST00000437639 3018 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
PDGFAP04085 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.8□□□□□ -1.32
PDGFAP04085 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 RNA5SP238-201ENST00000365464 120 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 MIR551B-201ENST00000384984 96 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 MT-TL1-201ENST00000386347 75 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PDGFAP04085 U8.14-201ENST00000390843 143 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 RNU6-1009P-201ENST00000390996 107 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 OR7E101P-201ENST00000400428 513 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AL136131.1-201ENST00000406079 803 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 GSTA9P-201ENST00000406231 611 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 SNORA11.3-201ENST00000408471 128 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AL139128.1-201ENST00000413921 941 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.8□□□□□ -1.32
PDGFAP04085 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 AC092634.6-201ENST00000418558 192 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 ELOCP14-201ENST00000428070 331 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 IGLV3-4-201ENST00000432300 244 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 ELOCP7-201ENST00000439968 331 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 AC022080.2-201ENST00000452932 533 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 RPS16P9-201ENST00000477220 427 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 OR9A1P-202ENST00000484361 945 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 RN7SL518P-201ENST00000491887 280 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC090638.1-201ENST00000498296 909 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 OR7E163P-201ENST00000505943 894 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 GAPDHP61-201ENST00000507324 1005 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 AC108064.1-201ENST00000513791 460 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
PDGFAP04085 HIGD1AP6-201ENST00000521833 279 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC068587.4-201ENST00000533893 186 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 AC089984.3-201ENST00000552838 363 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC138207.8-204ENST00000579588 527 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.8□□□□□ -1.32
PDGFAP04085 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.8□□□□□ -1.32
PDGFAP04085 AL157899.1-201ENST00000604110 936 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC112191.3-201ENST00000604371 277 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 AC010133.1-201ENST00000615809 842 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 SNORA11.6-201ENST00000619030 128 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 AC116158.1-201ENST00000560231 2129 ntBASIC6.8□□□□□ -1.32
PDGFAP04085 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
PDGFAP04085 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PDGFAP04085 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
PDGFAP04085 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.8□□□□□ -1.32
PDGFAP04085 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PDGFAP04085 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC017104.4-201ENST00000636283 1592 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC016930.1-201ENST00000468766 2205 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms