Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 C4BPAP1-201ENST00000415474 1893 ntBASIC5.45□□□□□ -1.54
APOEP02649 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.45□□□□□ -1.54
APOEP02649 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
APOEP02649 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
APOEP02649 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 RNU4-34P-201ENST00000410431 124 ntBASIC5.45□□□□□ -1.54
APOEP02649 RN7SKP126-201ENST00000411143 300 ntBASIC5.45□□□□□ -1.54
APOEP02649 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.45□□□□□ -1.54
APOEP02649 COX5BP7-201ENST00000414780 274 ntBASIC5.45□□□□□ -1.54
APOEP02649 CLUHP1-201ENST00000435012 1190 ntBASIC5.45□□□□□ -1.54
APOEP02649 RPS29P10-201ENST00000439197 166 ntBASIC5.45□□□□□ -1.54
APOEP02649 PRPF38AP1-201ENST00000451976 933 ntBASIC5.45□□□□□ -1.54
APOEP02649 DNAJB5P1-201ENST00000454004 806 ntBASIC5.45□□□□□ -1.54
APOEP02649 AL389915.2-201ENST00000454576 441 ntBASIC5.45□□□□□ -1.54
APOEP02649 RN7SL189P-201ENST00000468631 289 ntBASIC5.45□□□□□ -1.54
APOEP02649 RN7SL799P-201ENST00000475891 298 ntBASIC5.45□□□□□ -1.54
APOEP02649 RN7SL222P-201ENST00000476452 299 ntBASIC5.45□□□□□ -1.54
APOEP02649 RPS18P6-201ENST00000476880 458 ntBASIC5.45□□□□□ -1.54
APOEP02649 RPL7P41-201ENST00000485823 957 ntBASIC5.45□□□□□ -1.54
APOEP02649 RN7SL591P-201ENST00000496150 292 ntBASIC5.45□□□□□ -1.54
APOEP02649 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.45□□□□□ -1.54
APOEP02649 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.45□□□□□ -1.54
APOEP02649 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.45□□□□□ -1.54
APOEP02649 AC022832.1-201ENST00000530718 645 ntBASIC5.45□□□□□ -1.54
APOEP02649 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.45□□□□□ -1.54
APOEP02649 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.45□□□□□ -1.54
APOEP02649 AC040958.1-201ENST00000561102 201 ntBASIC5.45□□□□□ -1.54
APOEP02649 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 PRPF19P1-201ENST00000584766 898 ntBASIC5.45□□□□□ -1.54
APOEP02649 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.45□□□□□ -1.54
APOEP02649 AC135068.12-201ENST00000637370 931 ntBASIC5.45□□□□□ -1.54
APOEP02649 SAMMSON-227ENST00000642114 1199 ntBASIC5.45□□□□□ -1.54
APOEP02649 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.45□□□□□ -1.54
APOEP02649 MTND5P12-201ENST00000502851 1449 ntBASIC5.45□□□□□ -1.54
APOEP02649 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOEP02649 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 AL034549.2-201ENST00000618285 3373 ntBASIC5.45□□□□□ -1.54
APOEP02649 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.45□□□□□ -1.54
APOEP02649 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
APOEP02649 AC021242.1-201ENST00000507315 2035 ntBASIC5.45□□□□□ -1.54
APOEP02649 AC023421.1-201ENST00000590535 1785 ntBASIC5.44□□□□□ -1.54
APOEP02649 ADAM5-202ENST00000399789 1942 ntBASIC5.44□□□□□ -1.54
APOEP02649 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
APOEP02649 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
APOEP02649 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 ICE2P1-201ENST00000512800 1849 ntBASIC5.44□□□□□ -1.54
APOEP02649 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
APOEP02649 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 MIR600-201ENST00000385007 98 ntBASIC5.44□□□□□ -1.54
APOEP02649 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.44□□□□□ -1.54
APOEP02649 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.44□□□□□ -1.54
APOEP02649 NPM1P22-201ENST00000427761 952 ntBASIC5.44□□□□□ -1.54
APOEP02649 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.44□□□□□ -1.54
APOEP02649 AC069304.1-201ENST00000491593 704 ntBASIC5.44□□□□□ -1.54
APOEP02649 RPL15P21-201ENST00000495592 567 ntBASIC5.44□□□□□ -1.54
APOEP02649 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.44□□□□□ -1.54
APOEP02649 AC006427.1-201ENST00000514359 712 ntBASIC5.44□□□□□ -1.54
APOEP02649 AL671862.1-201ENST00000515851 349 ntBASIC5.44□□□□□ -1.54
APOEP02649 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.44□□□□□ -1.54
APOEP02649 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.44□□□□□ -1.54
APOEP02649 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.44□□□□□ -1.54
APOEP02649 RN7SL708P-201ENST00000580952 299 ntBASIC5.44□□□□□ -1.54
APOEP02649 OR7E18P-201ENST00000592589 702 ntBASIC5.44□□□□□ -1.54
APOEP02649 AL162431.4-201ENST00000604674 411 ntBASIC5.44□□□□□ -1.54
APOEP02649 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.44□□□□□ -1.54
APOEP02649 AC008079.2-201ENST00000623543 20396 ntBASIC5.44□□□□□ -1.54
APOEP02649 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.44□□□□□ -1.54
APOEP02649 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
APOEP02649 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOEP02649 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
APOEP02649 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
APOEP02649 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.43□□□□□ -1.54
APOEP02649 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms