Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 MIR193BHG-214ENST00000641765 509 ntBASIC4.4□□□□□ -1.71
HLA-DQB1P01920 MTCO1P46-201ENST00000451639 1491 ntBASIC4.4□□□□□ -1.71
HLA-DQB1P01920 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 AC068446.1-201ENST00000556425 1549 ntBASIC4.4□□□□□ -1.71
HLA-DQB1P01920 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.71
HLA-DQB1P01920 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB1P01920 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 RNU1-146P-201ENST00000364015 165 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 MIR195-201ENST00000385194 87 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 RPS24P12-201ENST00000402084 394 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AL121834.1-202ENST00000404494 277 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AL133388.1-201ENST00000404509 287 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 CEACAMP8-201ENST00000413902 580 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 SMC4P1-201ENST00000414479 527 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC004690.1-201ENST00000418216 328 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC093155.2-201ENST00000420734 937 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 RPL34P3-201ENST00000421454 338 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 EIF4EP1-201ENST00000422311 642 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 PRUNEP1-201ENST00000425846 705 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 GAPDHP34-201ENST00000432112 823 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC105399.1-202ENST00000447303 205 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 HLA-DPA3-207ENST00000454398 229 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 MIR744-201ENST00000578242 98 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC008115.3-201ENST00000614874 549 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC004232.3-201ENST00000622977 525 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC025262.3-201ENST00000623666 360 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 AC073593.1-201ENST00000624500 411 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 PROS2P-201ENST00000474651 1951 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB1P01920 OR13C1P-202ENST00000641378 2919 ntBASIC4.39□□□□□ -1.71
HLA-DQB1P01920 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AL359922.3-201ENST00000624779 1670 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 MUC2-202ENST00000613187 4845 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC007382.1-201ENST00000624376 2618 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 SAMMSON-213ENST00000641336 1521 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 OR8V1P-201ENST00000395193 873 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC002524.1-201ENST00000411687 547 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 SLC20A1P1-201ENST00000413906 956 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 SLC35E1P1-201ENST00000419313 864 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 RPL23AP37-201ENST00000479658 549 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 CYCSP22-201ENST00000517555 339 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC107958.1-201ENST00000556576 290 ntBASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQB1P01920 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms