Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 THAP12P8-201ENST00000447914 2115 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC107977.1-201ENST00000355745 939 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 OR7E156P-201ENST00000400303 464 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AL035079.1-201ENST00000405210 287 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 RN7SKP240-201ENST00000410583 375 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 RPL21P108-201ENST00000413857 481 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 Z95327.2-201ENST00000414579 1873 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 VN1R31P-201ENST00000417498 730 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 UBE2V2P1-201ENST00000434717 398 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC110602.1-201ENST00000437414 318 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 RAB9AP5-201ENST00000437794 597 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 RAB9AP2-201ENST00000443911 597 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 CST12P-201ENST00000457644 362 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC079168.1-201ENST00000458741 345 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC092754.1-201ENST00000472975 479 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC021146.3-201ENST00000511911 260 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC114781.3-201ENST00000512083 142 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 OR5H7P-201ENST00000514084 930 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC011270.1-201ENST00000558606 583 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC092121.1-201ENST00000569452 202 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 MIR4271-201ENST00000582451 67 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AL138895.2-201ENST00000603019 178 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC009597.2-201ENST00000604659 592 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC011626.1-201ENST00000604710 562 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC067838.1-201ENST00000606064 577 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC108673.3-201ENST00000609183 335 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 MIR6793-201ENST00000612376 63 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 TMEM30CP-203ENST00000637814 1035 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC015813.6-201ENST00000624409 5808 ntBASIC3.9□□□□□ -1.78
HLA-DQA1P01909 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DQA1P01909 PDZK1P1-202ENST00000425209 1350 ntBASIC3.9□□□□□ -1.78
HLA-DQA1P01909 CASC19-221ENST00000641309 1382 ntBASIC3.9□□□□□ -1.78
HLA-DQA1P01909 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.9□□□□□ -1.78
HLA-DQA1P01909 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HLA-DQA1P01909 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DQA1P01909 OR51C1P-202ENST00000641159 1444 ntBASIC3.9□□□□□ -1.78
HLA-DQA1P01909 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 RNFT1P3-201ENST00000340898 1052 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 RNA5SP146-201ENST00000410743 123 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC096644.3-201ENST00000416788 338 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 GTF2IP2-201ENST00000424290 697 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 NMNAT1P2-201ENST00000435192 860 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC006335.2-201ENST00000437993 330 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 MRPL48P1-201ENST00000445390 636 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 NOP56P2-201ENST00000447491 769 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AL122020.1-201ENST00000472287 459 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 LSM3P4-201ENST00000502948 309 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC025458.1-201ENST00000506046 166 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 SCARNA6.1-201ENST00000516989 238 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 MINCR-206ENST00000524335 499 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 PCNAP4-201ENST00000532690 730 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AL049830.4-201ENST00000555149 351 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DQA1P01909 RN7SL176P-201ENST00000580352 264 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 RN7SL708P-201ENST00000580952 299 ntBASIC3.9□□□□□ -1.79
HLA-DQA1P01909 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms