Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 UGT2B27P-201ENST00000505092 1620 ntBASIC7.63□□□□□ -1.19
CFAP99D6REC4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFAP99D6REC4 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CFAP99D6REC4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AL161891.1-201ENST00000621575 4636 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 OR11H5P-202ENST00000641612 1325 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 SNRPEP3-201ENST00000338402 276 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 IGKV7-3-201ENST00000357453 298 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 Y_RNA.128-201ENST00000363391 112 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 RNU6-282P-201ENST00000365357 103 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 MIR320B1-201ENST00000390209 79 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 RNU6-510P-201ENST00000391239 108 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC092952.1-201ENST00000397646 1209 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 TXNP7-201ENST00000406296 293 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AL034374.1-201ENST00000406329 351 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 ELOCP4-201ENST00000420090 333 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AL121776.1-201ENST00000429337 372 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC006480.1-201ENST00000449887 378 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC084871.2-201ENST00000503355 464 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC034159.1-201ENST00000513885 583 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 RN7SKP116-201ENST00000516902 319 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 RNU6-835P-201ENST00000516974 104 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 IGKV2D-10-201ENST00000520194 281 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 HIGD1AP6-201ENST00000521833 279 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC034105.3-201ENST00000565294 442 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC136944.5-201ENST00000573021 151 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC090236.2-201ENST00000587933 1101 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 BCRP9-201ENST00000605312 388 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC090948.1-201ENST00000607464 549 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC093311.1-201ENST00000506586 2021 ntBASIC7.62□□□□□ -1.19
CFAP99D6REC4 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.62□□□□□ -1.19
CFAP99D6REC4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFAP99D6REC4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms