Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 MCTS2P-201ENST00000394552 546 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AL354707.3-201ENST00000427308 331 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AL035458.1-201ENST00000433096 585 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 GAPDHP37-201ENST00000442317 968 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 HMGB3P6-201ENST00000444896 598 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 RPL7P32-201ENST00000457119 744 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC023050.1-201ENST00000498198 304 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC092593.2-201ENST00000513866 913 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 RNU6-513P-201ENST00000516104 104 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 OR4A2P-201ENST00000527276 913 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 GCSHP4-201ENST00000538792 439 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 MTND4LP24-201ENST00000572277 291 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 COX6CP7-201ENST00000597056 208 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AL596275.2-207ENST00000641188 675 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 PCAT14-202ENST00000627127 3935 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 AL445523.1-201ENST00000451184 1362 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.52□□□□□ -1.36
CCDC66A2RUB6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC66A2RUB6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC104454.1-201ENST00000421341 1401 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 SNORD116-1-201ENST00000384335 95 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 YWHAZP4-201ENST00000392459 708 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 CHMP1B2P-201ENST00000399581 597 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 HSFY4P-201ENST00000415994 1181 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RPA2P2-201ENST00000419698 796 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RPS3AP38-201ENST00000435889 763 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 MTCYBP12-201ENST00000440559 1134 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC064862.5-201ENST00000440618 334 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RPS10P18-201ENST00000442662 495 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AL034369.1-201ENST00000453808 477 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 ATG12P2-201ENST00000456830 416 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RN7SL83P-201ENST00000468131 297 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RN7SL369P-201ENST00000477138 299 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RN7SL326P-201ENST00000477493 296 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 RPS3AP22-201ENST00000488297 769 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC069304.1-201ENST00000491593 704 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC091435.1-201ENST00000505442 584 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC093816.1-201ENST00000515076 913 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC005951.1-201ENST00000576706 485 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms