Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ISCA1P6-201ENST00000427740 390 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ACTR3P2-201ENST00000439585 1257 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 RPL23AP20-201ENST00000447965 421 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 KLRA1P-201ENST00000503499 986 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 POU5F1P7-201ENST00000508759 541 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC093809.1-201ENST00000509155 340 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC233724.10-201ENST00000510454 409 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC016559.1-201ENST00000511420 199 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MTND6P2-201ENST00000512226 524 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC027309.2-201ENST00000520566 192 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 OR7E96P-201ENST00000530816 976 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC008083.2-201ENST00000546707 476 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 FRG2IP-201ENST00000563581 781 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC037471.2-201ENST00000564941 598 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 BNIP3P22-201ENST00000593399 556 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC004852.1-201ENST00000605206 154 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC011816.2-201ENST00000607089 556 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AL136985.2-201ENST00000607372 535 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC093788.1-201ENST00000609356 927 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC135050.6-202ENST00000613584 392 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC231657.1-201ENST00000624313 397 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC009166.2-201ENST00000624410 2833 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AL137918.1-201ENST00000624542 1922 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AC087045.3-201ENST00000623046 2468 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 MTCO1P11-201ENST00000429111 1528 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 GAPDHP24-201ENST00000328713 983 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 Y_RNA.58-201ENST00000362807 102 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 Y_RNA.154-201ENST00000363624 102 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RNY3P1-201ENST00000365085 102 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RNY3-201ENST00000365484 102 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 Y_RNA.431-201ENST00000384086 102 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 Y_RNA.490-201ENST00000384413 102 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 MIR498-201ENST00000385134 124 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AL390316.1-201ENST00000406279 553 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 VN1R8P-201ENST00000407739 893 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 SNORA2C-201ENST00000408564 137 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RNU6-195P-201ENST00000411352 109 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 MTCO3P12-201ENST00000416718 547 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 RAC1P4-201ENST00000419413 579 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 SNX18P3-201ENST00000424993 835 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 NPM1P34-201ENST00000428821 893 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 PHB2P1-201ENST00000434943 890 ntBASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDHB11Q9Y5F2 ST13P21-201ENST00000453250 1098 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms