Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RN7SL177P-201ENST00000476596 299 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 RPL32P33-201ENST00000487023 394 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 MTCO3P28-201ENST00000513351 515 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 RNU6-491P-201ENST00000516099 110 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 MIR2117-201ENST00000516780 80 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC103833.1-201ENST00000517442 172 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 MTATP6P15-201ENST00000527233 835 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC090666.1-201ENST00000578241 445 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AP001357.1-201ENST00000586304 1053 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC112503.1-201ENST00000608436 391 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 MIR8084-201ENST00000614105 89 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC107021.2-201ENST00000567714 2095 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 LINC02019-201ENST00000608605 2060 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 AC110373.1-201ENST00000505994 3505 ntBASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CTDP1Q9Y5B0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 BCORP1-203ENST00000513194 5093 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 ZNF29P-201ENST00000225587 168 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 GAPDHP24-201ENST00000328713 983 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 SNORA64.1-201ENST00000362600 132 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 OR6E1P-201ENST00000414424 923 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC115285.1-201ENST00000424879 736 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC005297.1-201ENST00000444765 862 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 RPS17P15-201ENST00000475609 349 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC098583.1-201ENST00000480875 255 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 PCNAP1-201ENST00000505363 709 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC021678.3-201ENST00000517893 476 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC010376.1-201ENST00000522101 334 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AL451049.1-201ENST00000608672 497 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 RNU6-1192P-201ENST00000612197 107 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 RNU6-489P-201ENST00000618289 107 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC079298.2-201ENST00000623885 459 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 HSPD1P7-201ENST00000447985 1686 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 AC125336.1-201ENST00000508893 2827 ntBASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTDP1Q9Y5B0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 UGT2B24P-201ENST00000514441 1597 ntBASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 IMMTP1-201ENST00000435590 2219 ntBASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 RNU5E-10P-201ENST00000363506 118 ntBASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 RN7SKP160-201ENST00000363804 340 ntBASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 AL360271.1-201ENST00000395679 510 ntBASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 AL391361.1-201ENST00000405580 489 ntBASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 OR51B3P-201ENST00000412287 913 ntBASIC6.69□□□□□ -1.34
CTDP1Q9Y5B0 AL357752.1-201ENST00000412817 349 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms