Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 EIF1AXP2-201ENST00000555940 413 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SL52P-201ENST00000584271 284 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC087283.1-201ENST00000604029 1074 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 TAS2R6P-201ENST00000605022 826 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AL512413.1-201ENST00000606489 382 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AL353600.1-201ENST00000608148 251 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SL787P-201ENST00000613000 284 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 uc_338.31-201ENST00000615595 186 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SL544P-201ENST00000617232 284 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SL763P-201ENST00000620922 284 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC015722.2-201ENST00000622210 551 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC107068.1-201ENST00000563286 4218 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AC023421.1-201ENST00000590535 1785 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 RNA5SP500-201ENST00000364486 119 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 RNA5SP223-201ENST00000365174 120 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 MIR551B-201ENST00000384984 96 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 GCNT1P4-201ENST00000404096 329 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 OR51A6P-201ENST00000418680 1004 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 HMGB3P24-201ENST00000433260 622 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AC046176.1-201ENST00000435260 1170 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 BX842559.2-201ENST00000451418 605 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AC093827.1-201ENST00000480094 861 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 NENFP3-201ENST00000503735 313 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 MTND6P2-201ENST00000512226 524 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AF186190.1-201ENST00000517470 480 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AC018442.3-201ENST00000523025 183 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AC011840.5-201ENST00000582125 771 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SL356P-201ENST00000582228 248 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 AP001273.1-201ENST00000624493 3152 ntBASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.43□□□□□ -1.7
KCNIP3Q9Y2W7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC063976.2-201ENST00000425667 3556 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC005294.1-201ENST00000355509 281 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 RPL10P10-201ENST00000403509 664 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AL354890.1-201ENST00000413730 346 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms