Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 U8.14-201ENST00000390843 143 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 NPM1P38-201ENST00000403835 865 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AL121834.1-202ENST00000404494 277 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AL589994.1-201ENST00000404962 340 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 SNORA3.1-201ENST00000408166 111 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC005002.1-201ENST00000447458 540 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 RPL7P52-201ENST00000449200 742 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC114755.1-201ENST00000453101 868 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 RNU6-261P-201ENST00000459506 102 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC048346.1-201ENST00000510247 144 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC022296.2-201ENST00000512424 202 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC018797.3-201ENST00000513388 1241 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC018523.1-201ENST00000534211 512 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC005726.4-201ENST00000582858 458 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AL953862.2-201ENST00000603089 820 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC087763.1-201ENST00000603391 286 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 ZNF710-AS1-202ENST00000620791 2133 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 MBP-206ENST00000397863 4800 ntTSL 3 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 OR1S2-201ENST00000302592 978 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 PPIAP22-201ENST00000358455 498 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 RNA5SP177-201ENST00000410122 107 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 RNU2-42P-201ENST00000410697 113 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 YWHAEP5-201ENST00000431545 765 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 H3F3AP5-201ENST00000475267 429 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC023194.1-201ENST00000493084 308 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AK6-204ENST00000512561 587 ntTSL 5 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 RNU6-1314P-201ENST00000517139 104 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AP000827.1-201ENST00000527814 258 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 OR5D15P-201ENST00000531671 942 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AL109766.1-201ENST00000555080 552 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC068790.5-201ENST00000602741 355 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 AC092999.1-201ENST00000624004 1924 ntBASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC9.62□□□□□ -0.87
TRIM35Q9UPQ4 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC018992.1-201ENST00000523778 2149 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms