Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.45□□□□□ -1.38
PPARGC1AQ9UBK2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.45□□□□□ -1.38
PPARGC1AQ9UBK2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PPARGC1AQ9UBK2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.45□□□□□ -1.38
PPARGC1AQ9UBK2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 SGO1P1-201ENST00000603525 1447 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL133243.2-201ENST00000610331 1621 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 YWHAZP6-201ENST00000399764 738 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL035422.1-201ENST00000414193 397 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL139158.1-201ENST00000424719 340 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 GAPDHP59-201ENST00000435908 267 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 MTND1P34-201ENST00000438556 671 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC016772.1-201ENST00000444170 1261 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL590004.3-202ENST00000445883 451 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC007327.1-201ENST00000447461 264 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 HIGD1AP16-201ENST00000450986 258 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 OSTCP1-201ENST00000455507 450 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 MTCO2P18-201ENST00000457151 658 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC113347.3-201ENST00000509113 148 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 MTCYBP16-201ENST00000509187 1129 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 NDUFB4P12-201ENST00000513465 390 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC135628.1-201ENST00000568867 534 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 VN1R83P-201ENST00000595685 445 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL591167.1-201ENST00000607321 456 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC013468.1-201ENST00000608680 598 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 FRG1HP-204ENST00000617940 757 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 AC079248.2-201ENST00000623779 326 ntBASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.44□□□□□ -1.38
PPARGC1AQ9UBK2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 RN7SKP108-201ENST00000411367 328 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 LINC01347-201ENST00000417964 355 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 PTP4A1P5-201ENST00000420305 455 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 PTP4A1P1-201ENST00000420539 515 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 C1DP1-201ENST00000426049 402 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 RPSAP65-201ENST00000429660 595 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 COX7BP2-201ENST00000437976 242 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 ISCA1P2-201ENST00000438679 421 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 UBE2D3P4-201ENST00000441973 436 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 MTND5P2-201ENST00000442927 1142 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 AC097499.1-201ENST00000444277 208 ntBASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.43□□□□□ -1.38
PPARGC1AQ9UBK2 AC026348.1-201ENST00000462549 1053 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms