Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC007998.1-201ENST00000474156 672 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 PPIAP19-201ENST00000486414 492 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 GTF2IP9-201ENST00000502460 301 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 AC010627.1-201ENST00000503819 1294 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 SNORD46.2-201ENST00000516021 102 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 MIR4776-2-201ENST00000580204 80 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 AC020916.2-201ENST00000591242 360 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 AL022067.1-201ENST00000602426 454 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 AL136131.3-201ENST00000607600 188 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 AL050303.3-201ENST00000613704 284 ntBASIC5.54□□□□□ -1.52
LRFN1Q9P244 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRFN1Q9P244 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
LRFN1Q9P244 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC068769.1-201ENST00000474767 2426 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 OR52B3P-201ENST00000314715 928 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 RN7SKP186-201ENST00000365371 303 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 RNA5SP284-201ENST00000384547 118 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AL035419.1-201ENST00000397037 564 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 DNAJC19P6-201ENST00000401853 280 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC079355.1-201ENST00000421770 223 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 LYPLA1P1-201ENST00000434514 622 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC092106.1-201ENST00000444291 373 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AL606517.1-201ENST00000446914 387 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 OR51B8P-201ENST00000449892 769 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AP006222.1-205ENST00000450734 457 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC005229.2-201ENST00000456995 399 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 NXT1P1-201ENST00000458481 316 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 RN7SL352P-201ENST00000466002 277 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 RN7SL269P-201ENST00000467795 305 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC093815.1-201ENST00000508637 280 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC110760.3-202ENST00000515177 371 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC021451.1-201ENST00000523498 1129 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC079600.1-201ENST00000550326 297 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AL121594.4-201ENST00000556211 1196 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC095057.3-201ENST00000567102 1157 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 RN7SL339P-201ENST00000580597 296 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC027243.2-201ENST00000602530 724 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AL355816.2-201ENST00000610049 647 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC004836.1-201ENST00000623032 634 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LRFN1Q9P244 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms