Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC027455.1-201ENST00000574104 594 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 FAM106CP-201ENST00000582212 507 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 VN1R87P-201ENST00000596706 487 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC063977.5-201ENST00000601044 974 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC234772.3-201ENST00000602277 528 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC073387.2-201ENST00000604797 784 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL159169.2-201ENST00000610061 1269 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC087683.2-201ENST00000611384 326 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL158062.1-201ENST00000619632 745 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL132640.2-201ENST00000559968 1698 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC007842.1-201ENST00000597336 2039 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC114786.1-201ENST00000512892 1415 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 RNU6-236P-201ENST00000363886 106 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC116036.1-201ENST00000412199 367 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 TMA16P2-201ENST00000413187 601 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 PCNPP4-201ENST00000414817 517 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC015977.1-201ENST00000418887 292 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC006065.1-201ENST00000422539 802 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 USP9YP24-201ENST00000434374 697 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC012075.1-201ENST00000436549 580 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 H3F3BP1-201ENST00000440551 403 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 USP9YP17-201ENST00000444617 696 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC087672.1-201ENST00000479876 766 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC025459.1-201ENST00000504072 156 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 RNU6-311P-201ENST00000516224 102 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC087888.1-201ENST00000550884 1254 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 MTCYBP23-201ENST00000558717 1102 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 IMMP1LP3-201ENST00000604197 224 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC007204.2-201ENST00000615022 616 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AL355974.3-201ENST00000617383 467 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC022079.2-201ENST00000619739 566 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 MIR6719-201ENST00000622428 87 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC006963.1-201ENST00000624003 1052 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 MRE11P1-201ENST00000464884 2127 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 AC130304.1-201ENST00000622942 2385 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 CASC19-248ENST00000641674 1356 ntBASIC6.53□□□□□ -1.36
VTA1Q9NP79 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.53□□□□□ -1.36
VTA1Q9NP79 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTA1Q9NP79 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
VTA1Q9NP79 FBXL21-201ENST00000297158 1305 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.52□□□□□ -1.37
VTA1Q9NP79 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 RNA5SP131-201ENST00000365452 119 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 MIR105-2-201ENST00000385083 81 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 TAS2R15P-201ENST00000390674 928 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AP003170.5-201ENST00000397185 335 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL445183.3-201ENST00000414168 502 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AL592310.1-201ENST00000414330 671 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 GTF2IP5-201ENST00000414608 731 ntBASIC6.52□□□□□ -1.37
VTA1Q9NP79 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms