Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 GCSHP4-201ENST00000538792 439 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 uc_338.18-201ENST00000615451 175 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 BX005214.3-202ENST00000619809 325 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC099494.2-201ENST00000623371 978 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC007996.1-201ENST00000620414 2821 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP505-201ENST00000364748 108 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP223-201ENST00000365174 120 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AL035419.1-201ENST00000397037 564 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 U3.32-201ENST00000408116 212 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 RN7SL860P-201ENST00000473738 223 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC097486.1-201ENST00000515331 210 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP43-201ENST00000516559 110 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 HNRNPRP2-201ENST00000528421 743 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC040958.1-201ENST00000561102 201 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AC022884.2-201ENST00000578535 580 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 MEMO1P5-201ENST00000604810 406 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 uc_338.7-201ENST00000621834 124 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 AL353662.3-201ENST00000625131 237 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.57□□□□□ -1.68
KIAA1549Q9HCM3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC133552.1-201ENST00000569988 4007 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 RN7SKP103-201ENST00000363848 320 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 RNVU1-6-201ENST00000364688 164 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 SNORA51.8-201ENST00000384234 132 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP345-201ENST00000410646 108 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 NIPA2P1-201ENST00000426223 976 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 RPS3AP53-201ENST00000454716 778 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC025164.1-201ENST00000496249 478 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 ENPP7P11-201ENST00000505915 627 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC125494.2-201ENST00000602431 657 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC087283.1-201ENST00000604029 1074 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 INTS6P1-201ENST00000504674 2530 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 MFSD8-216ENST00000641147 4009 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AP005432.1-201ENST00000580891 3485 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC068446.1-201ENST00000556425 1549 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AP001029.2-203ENST00000589795 4910 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 THAP12P4-201ENST00000528321 2266 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AL133270.1-201ENST00000402635 279 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 COX6B1P1-201ENST00000415962 213 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 TCEA1P3-201ENST00000443005 880 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms