Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 U3.3-201ENST00000362986 216 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 Y_RNA.625-201ENST00000411256 107 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 AL390774.1-201ENST00000411924 246 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 FAM96AP1-201ENST00000430879 482 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 CYCSP6-201ENST00000434498 302 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 RN7SL799P-201ENST00000475891 298 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 AC097173.1-201ENST00000505862 819 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 SNORA70.11-201ENST00000515987 138 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 SNORA70.13-201ENST00000516116 138 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 MIR6748-201ENST00000610433 71 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 BX005214.3-202ENST00000619809 325 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 AC018445.2-201ENST00000622987 260 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 SAMMSON-209ENST00000641222 1100 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 AL449283.1-201ENST00000602631 3403 ntBASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.97□□□□□ -1.61
LRTM1Q9HBL6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRTM1Q9HBL6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.96□□□□□ -1.61
LRTM1Q9HBL6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.96□□□□□ -1.61
LRTM1Q9HBL6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LRTM1Q9HBL6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC116158.1-201ENST00000560231 2129 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 RN7SKP162-201ENST00000363605 345 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 PEX12P1-201ENST00000400284 1048 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 U3.32-201ENST00000408116 212 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC211486.3-201ENST00000412694 621 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC006455.6-201ENST00000426192 893 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 CYCSP12-201ENST00000437729 300 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC091180.1-201ENST00000462104 372 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 SIAH1P1-201ENST00000479411 923 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 RN7SL547P-201ENST00000490793 290 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC108693.1-201ENST00000496068 432 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 SUMO2P4-201ENST00000504193 276 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 USP9YP2-201ENST00000504503 1000 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 USP9YP1-201ENST00000513521 1002 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 OR10G5P-201ENST00000532733 358 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC009852.2-201ENST00000567898 485 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AP005131.7-201ENST00000610087 611 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC079395.2-201ENST00000610982 737 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 CYP4F35P-202ENST00000636121 390 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 AC135068.12-201ENST00000637370 931 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 SCARNA15-201ENST00000607520 4325 ntBASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRTM1Q9HBL6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 AC010266.2-201ENST00000564741 3255 ntBASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 CASC19-221ENST00000641309 1382 ntBASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.95□□□□□ -1.62
LRTM1Q9HBL6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms