Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC087672.1-201ENST00000479876 766 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 RN7SL649P-201ENST00000496974 275 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 DUTP7-201ENST00000507982 486 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC112518.2-201ENST00000508565 425 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 RPS27AP18-201ENST00000515536 459 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 IGLV3-24-201ENST00000517477 197 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC013701.1-201ENST00000522657 465 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC068339.2-201ENST00000534395 618 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC125612.1-201ENST00000547580 377 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AP004607.9-201ENST00000618202 316 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC093671.1-201ENST00000624981 2929 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 MIR375-201ENST00000362103 64 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 RNU6-252P-201ENST00000363232 107 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 PEX12P1-201ENST00000400284 1048 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AL009179.1-201ENST00000406085 265 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AL355143.1-201ENST00000407101 841 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 RPS27AP6-201ENST00000427962 448 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 HMGB3P24-201ENST00000433260 622 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC114781.3-201ENST00000512083 142 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 RNA5SP271-201ENST00000516700 88 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 TOMM20P1-201ENST00000534518 427 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 DPPA2P4-201ENST00000563717 878 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC122134.1-202ENST00000569111 1201 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC092121.1-201ENST00000569452 202 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AL139022.2-201ENST00000606934 443 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 MIR8084-201ENST00000614105 89 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC007342.8-201ENST00000623278 678 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC010435.1-201ENST00000623353 1177 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC006484.1-201ENST00000435086 1884 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 HSPA8P17-201ENST00000427029 1382 ntBASIC5.38□□□□□ -1.55
BRF2Q9HAW0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
BRF2Q9HAW0 AC140134.1-201ENST00000511830 3544 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 U3.28-201ENST00000391249 210 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 HMGB1P13-201ENST00000406019 642 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms