Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC137800.2-201ENST00000574375 120 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 POLR3GP2-201ENST00000588366 668 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 MIR6127-201ENST00000614019 109 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC018692.2-201ENST00000624130 348 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 TPTEP1-208ENST00000636884 213 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AL049776.1-201ENST00000624600 2025 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 Z97832.2-201ENST00000605896 4261 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL359263.1-201ENST00000441188 2796 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC102941.1-201ENST00000567616 1537 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 MIR369-201ENST00000362155 70 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 RNU6-697P-201ENST00000363348 107 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 Y_RNA.188-201ENST00000363952 111 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL451142.1-201ENST00000375867 775 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 TRAV35-201ENST00000390462 330 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL049693.1-201ENST00000402760 611 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 RN7SKP140-201ENST00000411196 284 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 DPPA2P3-201ENST00000411853 655 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC211486.3-201ENST00000412694 621 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC114482.1-201ENST00000418010 247 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL389915.1-201ENST00000422463 466 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 RIMKLBP2-201ENST00000424737 654 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL450996.1-201ENST00000445574 1202 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC108161.1-201ENST00000461060 402 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC010655.3-201ENST00000478818 450 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC139783.2-201ENST00000504847 1145 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 RN7SKP35-201ENST00000517210 151 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC044913.1-201ENST00000557200 430 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC245014.2-201ENST00000603689 287 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC246785.4-201ENST00000605374 287 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC026336.5-201ENST00000624455 738 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AC241584.2-201ENST00000637142 2090 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC7.19□□□□□ -1.26
COL25A1Q9BXS0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms