Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PTP4A1P1-201ENST00000420539 515 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AL035660.1-201ENST00000422041 222 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 OR6D1P-201ENST00000436165 939 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC093166.3-201ENST00000448785 303 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 KF459542.1-201ENST00000450908 553 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 VDAC2P4-201ENST00000452925 711 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC079168.1-201ENST00000458741 345 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 RN7SL447P-201ENST00000494711 245 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AK6-204ENST00000512561 587 ntTSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 Y_RNA.667-201ENST00000516212 107 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 SCARNA16.4-201ENST00000516956 187 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 MRPS16P1-201ENST00000523462 412 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC008126.1-201ENST00000549019 480 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC011840.5-201ENST00000582125 771 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC015802.2-201ENST00000589690 189 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC005899.6-201ENST00000620729 297 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC111152.1-202ENST00000635848 339 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC015813.6-201ENST00000624409 5808 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 THAP12P8-201ENST00000447914 2115 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC093909.5-201ENST00000621839 1799 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 MTND5P23-201ENST00000430812 1655 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 IL6STP1-201ENST00000346911 1020 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 RNU1-150P-201ENST00000362491 162 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 MIR1203-201ENST00000408812 85 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC127526.2-201ENST00000426436 775 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC069285.2-201ENST00000440210 275 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AL136455.1-201ENST00000441083 1240 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 PTMAP3-201ENST00000447474 330 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 EIF2S2P5-201ENST00000457635 968 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 CBX1P5-201ENST00000475330 559 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC021006.1-201ENST00000489849 553 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 STMN1P2-201ENST00000508435 439 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC018797.1-201ENST00000510791 255 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 RNU6-615P-201ENST00000516065 106 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC125612.1-201ENST00000547580 377 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC079905.1-201ENST00000549280 475 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 RBM22P12-201ENST00000567098 1255 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC005341.1-201ENST00000571086 708 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC012616.1-201ENST00000600294 197 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 AC008691.1-209ENST00000642094 814 ntBASIC3.88□□□□□ -1.79
AP1S3Q96PC3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.88□□□□□ -1.79
AP1S3Q96PC3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms