Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU7-152P-201ENST00000458982 64 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 RN7SL233P-201ENST00000469988 277 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AC135999.1-201ENST00000478962 479 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 AC073522.1-201ENST00000483312 377 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 MRPS35P2-201ENST00000508242 191 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AC113352.1-201ENST00000513196 666 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 AP004609.2-201ENST00000532177 190 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AL163153.1-201ENST00000554223 283 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 MIR3680-2-201ENST00000578247 87 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 MIR4312-201ENST00000579909 76 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 MIR4680-201ENST00000580906 66 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 MIR3680-1-201ENST00000581433 87 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 MIR212-201ENST00000586026 110 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 RPS27AP19-201ENST00000597285 458 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AC096992.2-201ENST00000609553 1684 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 AL049541.2-201ENST00000626377 555 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 MIR665-201ENST00000635949 72 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 SAMMSON-203ENST00000641005 2168 ntBASIC8.16□□□□□ -1.1
LRCH3Q96II8 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.16□□□□□ -1.1
LRCH3Q96II8 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LRCH3Q96II8 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 CDR1-202ENST00000625883 1485 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 GNG5P1-201ENST00000255500 204 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 RN7SKP78-201ENST00000364711 318 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 RNU6-1300P-201ENST00000391046 108 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AL133260.1-201ENST00000405720 405 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 Z93242.1-201ENST00000427102 353 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC109583.1-201ENST00000432156 268 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AL606489.2-201ENST00000433886 234 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 SKP1P1-201ENST00000438081 489 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 NPM1P39-201ENST00000449818 867 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AL445991.1-201ENST00000450381 475 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 MTCO3P10-201ENST00000455912 772 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC079193.1-201ENST00000460497 588 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 MTND5P4-201ENST00000514978 288 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 RNU6-1314P-201ENST00000517139 104 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 CARSP2-201ENST00000520688 277 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 UBE2Q2P11-201ENST00000559691 205 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 RN7SL473P-201ENST00000580341 299 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC010525.2-201ENST00000590920 195 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AL953862.2-201ENST00000603089 820 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC104785.1-201ENST00000603220 588 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC087763.1-201ENST00000603391 286 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC8.15□□□□□ -1.1
LRCH3Q96II8 AC005753.1-201ENST00000623837 618 ntBASIC8.15□□□□□ -1.1
LRCH3Q96II8 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LRCH3Q96II8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.15□□□□□ -1.11
LRCH3Q96II8 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms