Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 STX3-208ENST00000641815 3236 ntBASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RTN4IP1Q8WWV3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 TET1P1-201ENST00000426627 2301 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01355-201ENST00000566551 5444 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RNA5SP335-201ENST00000363817 110 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RNA5SP242-201ENST00000364171 118 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AL513325.1-201ENST00000417716 1034 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 OR2AH1P-201ENST00000425717 928 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 HSPE1P16-201ENST00000426640 348 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 DSTNP5-201ENST00000427921 523 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AL389925.1-201ENST00000432257 728 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AL161722.2-201ENST00000434731 981 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RPS11P7-201ENST00000442125 465 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 MRPL35P2-201ENST00000448009 511 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 TPT1P1-201ENST00000458495 518 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RNA5SP103-201ENST00000459503 118 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RPL5P22-201ENST00000480199 884 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC058823.1-201ENST00000485315 474 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RN7SL423P-201ENST00000486202 304 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC138409.2-202ENST00000507274 458 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 HMGB3P16-201ENST00000508037 287 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AL139041.1-201ENST00000605480 610 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 WBP1LP8-201ENST00000617401 327 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC015914.2-201ENST00000618167 288 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 AC132825.8-201ENST00000640783 297 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 SAMMSON-209ENST00000641222 1100 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTN4IP1Q8WWV3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
RTN4IP1Q8WWV3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RTN4IP1Q8WWV3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RTN4IP1Q8WWV3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC007342.5-201ENST00000571340 2142 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 MIR143-201ENST00000385300 106 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 RNA5SP296-201ENST00000410523 111 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC013429.2-201ENST00000418798 781 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 CLUHP1-201ENST00000435012 1190 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 CYCSP12-201ENST00000437729 300 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 RPL7P45-201ENST00000455851 743 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AL136038.1-201ENST00000497246 351 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 IGKV3D-34-201ENST00000522638 302 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms