Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC022360.1-201ENST00000521058 340 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 MTND2P17-201ENST00000550281 688 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC040958.1-201ENST00000561102 201 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 CD24P2-201ENST00000565486 219 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC127024.5-201ENST00000580085 462 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 RN7SL708P-201ENST00000580952 299 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC008521.2-201ENST00000591021 259 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC005252.1-201ENST00000604518 1063 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AL162431.4-201ENST00000604674 411 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 NEAT1-202ENST00000501122 22743 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC022417.1-201ENST00000624768 1303 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 THAP12P5-201ENST00000405864 2275 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 RNA5SP335-201ENST00000363817 110 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 RNU1-77P-201ENST00000390868 162 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 HMGB3P7-201ENST00000400214 611 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AL589994.1-201ENST00000404962 340 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 COX5BP7-201ENST00000414780 274 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 OR13Z1P-201ENST00000416141 834 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 CLUHP1-201ENST00000435012 1190 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 TMX2P1-201ENST00000436507 708 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 HSPE1P22-201ENST00000456856 327 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 RN7SL189P-201ENST00000468631 289 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 USP9YP2-201ENST00000504503 1000 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 USP9YP1-201ENST00000513521 1002 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC107918.3-201ENST00000533272 382 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC027544.3-201ENST00000535082 757 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC106730.2-201ENST00000566641 540 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC015720.2-201ENST00000567709 334 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 MIR1910-201ENST00000636955 80 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 CASC19-221ENST00000641309 1382 ntBASIC5.02□□□□□ -1.61
CLHC1Q8NHS4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms