Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL121890.2-201ENST00000617644 465 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 TTC41P-205ENST00000551270 3963 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AL353763.1-201ENST00000624467 1628 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AC063976.2-201ENST00000425667 3556 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 SNORA71.3-201ENST00000362582 128 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 ST13P16-201ENST00000401760 781 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 RNU4-25P-201ENST00000410569 230 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 MTND2P28-201ENST00000457540 1044 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AC007346.2-201ENST00000564816 892 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AC093227.2-201ENST00000589357 285 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AC022146.1-201ENST00000595307 847 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AL450472.3-201ENST00000615578 367 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 OR8B1P-202ENST00000641132 1178 ntBASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC168Q8NDH2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 ZNF652P1-201ENST00000442420 1309 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 MIR105-1-201ENST00000385222 81 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 U3.30-201ENST00000391308 210 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 RPL7P57-201ENST00000423238 740 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC010733.1-201ENST00000451515 401 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 ATP5LP5-201ENST00000483050 299 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AP002812.1-201ENST00000495378 474 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC021106.3-201ENST00000623925 531 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC007998.4-201ENST00000612496 2533 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 SNORD46.1-201ENST00000364139 104 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC021106.1-201ENST00000509020 1058 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC004076.2-201ENST00000620532 3323 ntBASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC168Q8NDH2 AC006511.3-201ENST00000624929 1783 ntBASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 MIR129-1-201ENST00000384972 72 ntBASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 GPS2P1-201ENST00000411761 986 ntBASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 TXNP5-201ENST00000441043 315 ntBASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC168Q8NDH2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms