Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 Y_RNA.460-201ENST00000384255 102 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 Y_RNA.529-201ENST00000384586 119 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RNA5SP23-201ENST00000391006 105 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AL590762.1-201ENST00000391782 432 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RPL5P5-201ENST00000392009 893 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RPL5P34-201ENST00000426545 891 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AL031663.1-201ENST00000437445 219 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 PCNPP2-201ENST00000441651 455 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RPS7P10-201ENST00000464254 603 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC026254.1-201ENST00000479473 431 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC114967.1-201ENST00000504890 259 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC111000.3-201ENST00000508057 576 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC006390.1-201ENST00000508068 283 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 MIR4637-201ENST00000582405 84 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RPL23AP77-201ENST00000588044 463 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC090948.2-201ENST00000607363 564 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AL451054.3-201ENST00000611115 776 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RNVU1-19-201ENST00000613023 167 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RN7SL301P-202ENST00000618767 298 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 U1.31-201ENST00000620022 160 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AP003175.1-201ENST00000641383 6658 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC130304.1-201ENST00000622942 2385 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 CDC27P2-201ENST00000425026 1922 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AL121768.1-201ENST00000613917 2544 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC018688.1-201ENST00000636528 1754 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 MAPK10-365ENST00000641902 3825 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC092821.3-202ENST00000641304 2767 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 SNORA63-201ENST00000363450 132 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-777P-201ENST00000364265 104 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 H2AFZP3-201ENST00000394213 387 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 FAT1P1-201ENST00000406588 507 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 SNORD3J-201ENST00000408473 190 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 MTND3P17-201ENST00000416968 344 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 GNAI2P2-201ENST00000417003 916 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AL049758.1-201ENST00000423154 397 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC126124.1-201ENST00000426104 185 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms