Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AP003175.1-201ENST00000641383 6658 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 DCAF13P1-201ENST00000495256 1330 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 SNORA63-201ENST00000363450 132 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 RNU6-1066P-201ENST00000363573 105 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 Y_RNA.573-201ENST00000384763 105 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 RNA5SP53-201ENST00000391299 120 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL353133.1-201ENST00000407695 401 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 RN7SKP232-201ENST00000410170 290 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 RNA5SP280-201ENST00000411230 115 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL450992.3-201ENST00000413192 568 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 RPLP1P10-201ENST00000413972 339 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL773545.3-201ENST00000414297 706 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL139184.1-202ENST00000422303 222 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 RPS27AP14-201ENST00000422868 454 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 PTPN2P1-201ENST00000423212 1072 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 IGLV3-4-201ENST00000432300 244 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC007677.1-201ENST00000445757 515 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 VDAC2P4-201ENST00000452925 711 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC112206.1-201ENST00000468416 477 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 NDUFA5P12-201ENST00000503796 343 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 OR6M2P-201ENST00000529831 871 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 MIR4428-201ENST00000584884 73 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 BNIP3P8-201ENST00000597863 560 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL683826.1-201ENST00000624104 627 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 SNORA43.5-201ENST00000631270 138 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC006026.1-201ENST00000444025 1803 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 ICE2P1-201ENST00000512800 1849 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AL031985.3-201ENST00000565390 2449 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 CYP1D1P-201ENST00000416662 1433 ntBASIC7.61□□□□□ -1.19
RNF135Q8IUD6 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF135Q8IUD6 AP002364.1-201ENST00000623330 3386 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC009166.2-201ENST00000624410 2833 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 RNU1-65P-201ENST00000363919 148 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 RNU6-723P-201ENST00000383973 107 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 TMSB4XP8-201ENST00000402089 135 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AL133260.1-201ENST00000405720 405 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 TMSB4XP6-201ENST00000415187 135 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 LINC00993-201ENST00000420453 540 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 TMSB4XP1-201ENST00000424567 135 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 TIMM9P3-201ENST00000428659 274 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 VDAC1P6-201ENST00000430062 855 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 ZYG11AP1-201ENST00000430329 837 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms